RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 IRF7Q92985 503 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TMA16Q96EY4 203 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 ZFYVE19Q96K21 471 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 RNF157Q96PX1 679 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 EPAS1Q99814 870 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TMEM121Q9BTD3 319 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TRMT61BQ9BVS5 477 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 CALN1Q9BXU9 219 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 RETREG1Q9H6L5 497 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 SAYSD1Q9NPB0 183 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ARHGEF4Q9NR80 690 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 SPHK2Q9NRA0 654 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 MARK1Q9P0L2 795 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 IGSF9Q9P2J2 1179 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 KLHL42Q9P2K6 505 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 PRKAG3Q9UGI9 489 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 SHOC2Q9UQ13 582 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 CHD5Q8TDI0 1954 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 OTOL1A6NHN0 477 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 WASH4PA8MWX3 477 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 H3BRJ5 948 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 SGK1O00141 431 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TSPAN3O60637 253 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 PENKP01210 267 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 BMP1P13497 986 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 CREB1P16220 341 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 EPHB2P29323 1055 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ARL4AP40617 200 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 IFNAR2P48551 515 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TPI1P60174 286 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 OTUD4Q01804 1114 aaKnown RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 GRM2Q14416 872 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 PDGFRLQ15198 375 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 DHCR24Q15392 516 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 LY6G5CQ5SRR4 150 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 FYB2Q5VWT5 728 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TRIM68Q6AZZ1 485 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 CCDC121Q6ZUS5 278 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ADHFE1Q8IWW8 467 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 LRRC34Q8IZ02 419 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 CFAP52Q8N1V2 620 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 RIBC1Q8N443 379 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 TTC13Q8NBP0 860 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ACTL9Q8TC94 416 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TBC1D31Q96DN5 1066 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 TTC25Q96NG3 672 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 RPRD1AQ96P16 312 aaPredicted RBP10.17□□□□□ -0.78
DDB1-202ENST00000414411 CCDC77Q9BR77 488 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 ZYG11BQ9C0D3 744 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 HPS4Q9NQG7 708 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 MPP6Q9NZW5 540 aa10.17□□□□□ -0.78
DDB1-202ENST00000414411 DCLK1O15075 740 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 FGF10O15520 208 aaPredicted RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 CST8O60676 142 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 IFNB1P01574 187 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 ARSAP15289 507 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 RHOQP17081 205 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 ERCC2P18074 760 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 AMPD1P23109 780 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 GDI1P31150 447 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 DYNLT1P63172 113 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 ZP2Q05996 745 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 TNK2Q07912 1038 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 MPPE1Q53F39 396 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 RABGAP1LQ5R372 815 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 TTC39BQ5VTQ0 682 aaPredicted RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 SLC9A4Q6AI14 798 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 RWDD4Q6NW29 188 aaKnown RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 TPGS1Q6ZTW0 290 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 PIGWQ7Z7B1 504 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 CYP4X1Q8N118 509 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 HJURPQ8NCD3 748 aaPredicted RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 CCDC197Q8NCU1 140 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 PRCCQ92733 491 aaPredicted RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 P3H4Q92791 437 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 ATP2A3Q93084 1043 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 KLC2Q9H0B6 622 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 EBF3Q9H4W6 596 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 ETNK2Q9NVF9 386 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 TMEM248Q9NWD8 314 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 SAE1Q9UBE0 346 aaPredicted RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 ACTL7BQ9Y614 415 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 BDP1A6H8Y1 2624 aa10.16□□□□□ -0.78
DDB1-202ENST00000414411 TCF20Q9UGU0 1960 aaKnown RBP10.16□□□□□ -0.78
DDB1-202ENST00000414411 FOXO6A8MYZ6 492 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 TBL1XO60907 577 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 CLDN11O75508 207 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 CYP17A1P05093 508 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 BRAFP15056 766 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 HOXD9P28356 352 aaPredicted RBP10.15□□□□□ -0.78
DDB1-202ENST00000414411 CDH4P55283 916 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 ACTN3Q08043 901 aaPredicted RBP10.15□□□□□ -0.78
DDB1-202ENST00000414411 FASTKD3Q14CZ7 662 aaKnown RBP10.15□□□□□ -0.78
DDB1-202ENST00000414411 LRRC14Q15048 493 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 GAB4Q2WGN9 574 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 CHST9Q7L1S5 443 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 YAF2Q8IY57 180 aa10.15□□□□□ -0.78
DDB1-202ENST00000414411 PLD5Q8N7P1 536 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms