RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 LDLRAD1Q5T700 205 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 RASIP1Q5U651 963 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 CWF19L1Q69YN2 538 aaKnown RBP15.22■□□□□ 0.03
TTC39A-208ENST00000413473 NAPEPLDQ6IQ20 393 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 TMC7Q7Z402 723 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 CNTD1Q8N815 330 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 KYQ8NBH2 561 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 NPLOC4Q8TAT6 608 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 LENG1Q96BZ8 264 aaPredicted RBP15.22■□□□□ 0.03
TTC39A-208ENST00000413473 PGAP3Q96FM1 320 aaPredicted RBP15.22■□□□□ 0.03
TTC39A-208ENST00000413473 CNDP1Q96KN2 507 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 TSNARE1Q96NA8 513 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 CDRT15Q96T59 188 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 RHOJQ9H4E5 214 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 STK39Q9UEW8 545 aa15.22■□□□□ 0.03
TTC39A-208ENST00000413473 KIF3CO14782 793 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 CABYRO75952 493 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 SLC35E2BP0CK96 405 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 MSX2P35548 267 aaPredicted RBP15.21■□□□□ 0.03
TTC39A-208ENST00000413473 HADHAP40939 763 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 CSRP3P50461 194 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 PRPSAP1Q14558 356 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 MFSD10Q14728 455 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 TMEM198Q66K66 360 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 DSELQ8IZU8 1212 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 FSTL5Q8N475 847 aaPredicted RBP15.21■□□□□ 0.03
TTC39A-208ENST00000413473 SPATA22Q8NHS9 363 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 KIFC1Q9BW19 673 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
TTC39A-208ENST00000413473 ANKRD6Q9Y2G4 727 aa15.21■□□□□ 0.03
TTC39A-208ENST00000413473 TXNDC9O14530 226 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 CASQ2O14958 399 aaPredicted RBP15.21■□□□□ 0.02
TTC39A-208ENST00000413473 DDHD2O94830 711 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 ADAM17P78536 824 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 PRKAA1Q13131 559 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 GRB14Q14449 540 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 SLC41A1Q8IVJ1 513 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 RDH11Q8TC12 318 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 DPF3Q92784 378 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.02
TTC39A-208ENST00000413473 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.02
TTC39A-208ENST00000413473 F9P00740 461 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 JUNP05412 331 aaKnown RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CXCR3P49682 368 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CTBP1Q13363 440 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CYLC2Q14093 348 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 ZNF460Q14592 562 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 LIN52Q52LA3 116 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 RAB41Q5JT25 222 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 SDCCAG8Q86SQ7 713 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 ST13P4Q8IZP2 240 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CENPLQ8N0S6 344 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 SPATA6LQ8N4H0 392 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CATSPER2Q96P56 530 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 SERPINI1Q99574 410 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 RHOBTB2Q9BYZ6 727 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 TRIM4Q9C037 500 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 UNKQ9C0B0 810 aaKnown RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CENPFP49454 3210 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 UNCXA6NJT0 531 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CFLARO15519 480 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 MT-CYBP00156 380 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 SRGAP2BP0DMP2 458 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 ALDH1A3P47895 512 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 AFF1P51825 1210 aaKnown RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 SLC12A1Q13621 1099 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 POU6F1Q14863 301 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 C16orf89Q6UX73 402 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 ARHGAP36Q6ZRI8 547 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 MFN1Q8IWA4 741 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 DENND6AQ8IWF6 608 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 LSMEM2Q8N112 164 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 ICA1LQ8NDH6 482 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 STYXQ8WUJ0 223 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 RNF34Q969K3 372 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 RCN3Q96D15 328 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 NSMCE4AQ9NXX6 385 aa15.2■□□□□ 0.02
TTC39A-208ENST00000413473 PRPF19Q9UMS4 504 aaKnown RBP15.2■□□□□ 0.02
TTC39A-208ENST00000413473 CAPN8A6NHC0 703 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PEX1O43933 1283 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 DLX3O60479 287 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 VAPBO95292 243 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 CALRP27797 417 aaKnown RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 THOP1P52888 689 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 SATB1Q01826 763 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 FOLH1Q04609 750 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 MAP3K21Q5TCX8 1036 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
TTC39A-208ENST00000413473 BHLHA9Q7RTU4 235 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 LINC00523Q86TU6 105 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PQLC1Q8N2U9 271 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 ZFAND2BQ8WV99 257 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 GCNAQ96QF7 691 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 FTHL17Q9BXU8 183 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 XPR1Q9UBH6 696 aa15.19■□□□□ 0.02
TTC39A-208ENST00000413473 PSMD13Q9UNM6 376 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms