RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CYS1Q717R9 158 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 COLGALT2Q8IYK4 626 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 NPWQ8N729 165 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 SERAC1Q96JX3 654 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 KLF6Q99612 283 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 CEP41Q9BYV8 373 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 PITPNM3Q9BZ71 974 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 OSBPL2Q9H1P3 480 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 SMYD2Q9NRG4 433 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 FBXO9Q9UK97 447 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 SNX10Q9Y5X0 201 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 SDR42E2A6NKP2 422 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 GOLGA8RI6L899 631 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TNFRSF10BO14763 440 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 MTSS1O43312 755 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TRPA1O75762 1119 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 EIF2S1P05198 315 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 MX2P20592 715 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 PTPN3P26045 913 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 CYP2C18P33260 490 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 SLC5A3P53794 718 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 GALNT2Q10471 571 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 IFRD2Q12894 506 aaPredicted RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TCP10LQ8TDR4 215 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 APBB2Q92870 758 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 RNF34Q969K3 372 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TBC1D10AQ9BXI6 508 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 ATAD3AQ9NVI7 634 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 ZNF638Q14966 1978 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 PTPRDP23468 1912 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 PATJQ8NI35 1801 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 GOLGA8TH3BQL2 631 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 KCNK1O00180 336 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 ENTPD5O75356 428 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 KRT37O76014 449 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 LRIG2O94898 1065 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 OAZ2O95190 189 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 INHAP05111 366 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 ADRA1DP25100 572 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 EPHB2P29323 1055 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 SERPINB6P35237 376 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 GRIK1P39086 918 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 NEK3P51956 506 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 ARFIP2P53365 341 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 RELAQ04206 551 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 DNAJC3Q13217 504 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 EIF4EBP2Q13542 120 aaPredicted RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 SEPT7Q16181 437 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 LGSNQ5TDP6 509 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TRMT10BQ6PF06 316 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 PID1Q7Z2X4 250 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 C11orf74Q86VG3 221 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TTC8Q8TAM2 541 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 HDAC11Q96DB2 347 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 APOPT1Q96IL0 206 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TRIM56Q9BRZ2 755 aaKnown RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 ABCC13Q9NSE7 274 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 TBC1D13Q9NVG8 400 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 MOCS1Q9NZB8 636 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 KLHL8Q9P2G9 620 aaPredicted RBP13.24□□□□□ -0.29
LITAF-203ENST00000413364 STARD13Q9Y3M8 1113 aa13.24□□□□□ -0.29
LITAF-203ENST00000413364 WDR27A2RRH5 827 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 TRIM49D1C9J1S8 452 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 FBP2O00757 339 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 IRAK2O43187 625 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 GNRH1P01148 92 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 CSH1P0DML2 217 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 CSH2P0DML3 217 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
LITAF-203ENST00000413364 OR1G1P47890 313 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 CNGA3Q16281 694 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 SLC39A12Q504Y0 691 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 KLHL35Q6PF15 583 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 FAM47EQ6ZV65 393 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 DCP1BQ8IZD4 617 aaKnown RBP13.23□□□□□ -0.29
LITAF-203ENST00000413364 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 NMD3Q96D46 503 aaKnown RBP13.23□□□□□ -0.29
LITAF-203ENST00000413364 FTHL17Q9BXU8 183 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 TLE6Q9H808 572 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 TRPC7Q9HCX4 862 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 SLC17A7Q9P2U7 560 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 DYTNA2CJ06 578 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 ARVCFO00192 962 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 LPXNO60711 386 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 EDF1O60869 148 aaKnown RBP13.23□□□□□ -0.29
LITAF-203ENST00000413364 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 OR4Q2P0C623 313 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 COL6A1P12109 1028 aa13.23□□□□□ -0.29
LITAF-203ENST00000413364 ENDOUP21128 410 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms