RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SLC35C1Q96A29 364 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 DGCR6LQ9BY27 220 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 SLC7A5P2Q9GIP4 190 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 NEUROG2Q9H2A3 272 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 OLA1Q9NTK5 396 aaKnown RBP8.63□□□□□ -1.03
PBRM1-209ENST00000412587 THAP1Q9NVV9 213 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 SLC30A1Q9Y6M5 507 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 BCL9LQ86UU0 1499 aa8.63□□□□□ -1.03
PBRM1-209ENST00000412587 CYP3A7-CYP3A51PA0A087WV96 503 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 FAM237BA0A1B0GVD1 139 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ATRNO75882 1429 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ABHD2P08910 425 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 DBTP11182 482 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 CYP3A7P24462 503 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 UBE3AQ05086 875 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TWF1Q12792 350 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 BNIP3Q12983 259 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ANGPT1Q15389 498 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 MYLK3Q32MK0 819 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 GARNL3Q5VVW2 1013 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 C1orf186Q6ZWK4 172 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ARMC8Q8IUR7 673 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 C12orf56Q8IXR9 622 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 SIPA1Q96FS4 1042 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 DUSP9Q99956 384 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 DCDC2Q9UHG0 476 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 PCYOX1Q9UHG3 505 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 VPS51Q9UID3 782 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 PRPF19Q9UMS4 504 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 HEATR9A2RTY3 570 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 KRT87PA6NCN2 255 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 NOGQ13253 232 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 CXCL17Q6UXB2 119 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ZNF571Q7Z3V5 609 aaPredicted RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 SLC47A2Q86VL8 602 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 RAB43Q86YS6 212 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ZSWIM2Q8NEG5 633 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 IPMKQ8NFU5 416 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ART4Q93070 314 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ZBTB45Q96K62 511 aaPredicted RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 PORCNQ9H237 461 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 GLTPD2A6NH11 291 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 PRPF4O43172 522 aaKnown RBP eCLIP8.62□□□□□ -1.033e-7■■■■□ 23.9
PBRM1-209ENST00000412587 FBXO21O94952 628 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TGDSO95455 350 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 CKMP06732 381 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TRAP1Q12931 704 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 IMPG1Q17R60 797 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 OVOS1Q6IE37 1185 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 OGFOD2Q6N063 350 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 STK32CQ86UX6 486 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ZFP28Q8NHY6 868 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 IL31RAQ8NI17 732 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 SLC20A1Q8WUM9 679 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ASZ1Q8WWH4 475 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 CLPTM1LQ96KA5 538 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 CACNA2D2Q9NY47 1150 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TRPV2Q9Y5S1 764 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 CCNE2O96020 404 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 EGFRP00533 1210 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ITGB5P18084 799 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 STT3AP46977 705 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 RXRGP48443 463 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 SP3Q02447 781 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 GNA12Q03113 381 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ILF2Q12905 390 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 LDLRAP1Q5SW96 308 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TMC7Q7Z402 723 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TRIM69Q86WT6 500 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 ABRAQ8N0Z2 381 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 FAM71DQ8N9W8 422 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 C19orf18Q8NEA5 215 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TRUB1Q8WWH5 349 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 USP13Q92995 863 aaPredicted RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 NUAK2Q9H093 628 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 RMND5AQ9H871 391 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 DDX43Q9NXZ2 648 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TRPM5Q9NZQ8 1165 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 KIF17Q9P2E2 1029 aa8.62□□□□□ -1.03
PBRM1-209ENST00000412587 TRMT6Q9UJA5 497 aaKnown RBP8.62□□□□□ -1.03
PBRM1-209ENST00000412587 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
PBRM1-209ENST00000412587 PLA2G6O60733 806 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 NELFEP18615 380 aaKnown RBP8.61□□□□□ -1.03
PBRM1-209ENST00000412587 MAPK12P53778 367 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 ABATP80404 500 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 GPR142Q7Z601 462 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 TRABD2AQ86V40 505 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 SH3KBP1Q96B97 665 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 C12orf43Q96C57 262 aaKnown RBP8.61□□□□□ -1.03
PBRM1-209ENST00000412587 LIN28AQ9H9Z2 209 aaKnown RBP8.61□□□□□ -1.03
PBRM1-209ENST00000412587 EXOSC4Q9NPD3 245 aaKnown RBP8.61□□□□□ -1.03
PBRM1-209ENST00000412587 TMEM9Q9P0T7 183 aa8.61□□□□□ -1.03
PBRM1-209ENST00000412587 SPATA2Q9UM82 520 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms