RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GPNMBQ14956 572 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SLC1A5Q15758 541 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ANO4Q32M45 955 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 AFMIDQ63HM1 303 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RNF43Q68DV7 783 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RWDD4Q6NW29 188 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CASC4Q6P4E1 433 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TRPM8Q7Z2W7 1104 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ANKRD33Q7Z3H0 272 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CTU1Q7Z7A3 348 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 PRPF39Q86UA1 669 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CCDC33Q8N5R6 958 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RTL3Q8N8U3 475 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ATP6V0D2Q8N8Y2 350 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RAB3IL1Q8TBN0 382 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ARNTL2Q8WYA1 636 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CHRDQ9H2X0 955 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RUBCNLQ9H714 662 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MLXIPLQ9NP71 852 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 HAUS2Q9NVX0 235 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MARCH5Q9NX47 278 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 PRKAG3Q9UGI9 489 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 VANGL2Q9ULK5 521 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TRIM17Q9Y577 477 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 AK5Q9Y6K8 562 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MYO18AQ92614 2054 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 FAM237BA0A1B0GVD1 139 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 WDR27A2RRH5 827 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MTMR11A4FU01 709 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 E9PAM4 449 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 KLF11O14901 512 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MATN3O15232 486 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 EDF1O60869 148 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 USP1O94782 785 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 AMHP03971 560 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 GALTP07902 379 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CPB1P15086 417 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MGAT1P26572 445 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ALDH3A1P30838 453 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 FOXN2P32314 431 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CD68P34810 354 aaPredicted RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 GRIA1P42261 906 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ETV4P43268 484 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SLC11A1P49279 550 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 NDST2P52849 883 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TBX4P57082 545 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SESN2P58004 480 aaPredicted RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RING1Q06587 406 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ACTN3Q08043 901 aaPredicted RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MGAT5Q09328 741 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CDH17Q12864 832 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 FYB2Q5VWT5 728 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ZNF438Q7Z4V0 828 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TMEM135Q86UB9 458 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ARHGAP12Q8IWW6 846 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 UMODL1-AS1Q8N2C9 162 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MPP5Q8N3R9 675 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ZSCAN18Q8TBC5 510 aaPredicted RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 OVCA2Q8WZ82 227 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ATP2A3Q93084 1043 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 FBXO32Q969P5 355 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 OXNAD1Q96HP4 312 aaPredicted RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SERAC1Q96JX3 654 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 BTN2A3PQ96KV6 586 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 FCRL5Q96RD9 977 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 IL12RB2Q99665 862 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 CPNE1Q99829 537 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TTPALQ9BTX7 342 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 GPR62Q9BZJ7 368 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 ZCCHC2Q9C0B9 1178 aaKnown RBP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SIK2Q9H0K1 926 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 RASSF4Q9H2L5 321 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 NMUR1Q9HB89 426 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
CXCR4-202ENST00000409817 NSMCE4AQ9NXX6 385 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TXNDC16Q9P2K2 825 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 HSFX1Q9UBD0 423 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 SFMBT1Q9UHJ3 866 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 PHTF1Q9UMS5 762 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 DYRK1BQ9Y463 629 aa7.64□□□□□ -1.19
CXCR4-202ENST00000409817 TANC1Q9C0D5 1861 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 VWA8A3KMH1 1905 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 ZNF638Q14966 1978 aaKnown RBP7.63□□□□□ -1.19
CXCR4-202ENST00000409817 IGLV3-10A0A075B6K4 115 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 CXorf49A8MYA2 514 aaPredicted RBP7.63□□□□□ -1.19
CXCR4-202ENST00000409817 MAFKO60675 156 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 TGDSO95455 350 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 JCHAINP01591 159 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 CSH1P0DML2 217 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 CSH2P0DML3 217 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 TROVE2P10155 538 aaKnown RBP eCLIP7.63□□□□□ -1.19
CXCR4-202ENST00000409817 HAPLN1P10915 354 aaPredicted RBP7.63□□□□□ -1.19
CXCR4-202ENST00000409817 CCNB1P14635 433 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 NFKB1P19838 968 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 ADRA1DP25100 572 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 CRHR1P34998 444 aa7.63□□□□□ -1.19
CXCR4-202ENST00000409817 TUFMP49411 452 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms