RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 DONSONQ9NYP3 566 aa20.45■□□□□ 0.86
USP39-204ENST00000409766 HAO1Q9UJM8 370 aa20.45■□□□□ 0.86
USP39-204ENST00000409766 TIMM44O43615 452 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 PQBP1O60828 265 aaKnown RBP20.44■□□□□ 0.86
USP39-204ENST00000409766 DNAJC6O75061 913 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 ZDHHC11BP0C7U3 371 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 MYL2P10916 166 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 STX3Q13277 289 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 POU6F1Q14863 301 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 RANBP10Q6VN20 620 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 ZCCHC23Q6ZST2 131 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 IGSF8Q969P0 613 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 SCLYQ96I15 445 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 MRGPRX2Q96LB1 330 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 OXCT2Q9BYC2 517 aaPredicted RBP20.44■□□□□ 0.86
USP39-204ENST00000409766 LRMDAQ9H2I8 198 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 SAR1AQ9NR31 198 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 TMEM216Q9P0N5 145 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 ZNF212Q9UDV6 495 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 TANC1Q9C0D5 1861 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 PMPCBO75439 489 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 GMPRP36959 345 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 RENBPP51606 427 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 RING1Q06587 406 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 PCLAFQ15004 111 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 RAP1GAP2Q684P5 730 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 POTEHQ6S545 545 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 PRSS55Q6UWB4 352 aaPredicted RBP20.44■□□□□ 0.86
USP39-204ENST00000409766 THAP1Q9NVV9 213 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 KCNK4Q9NYG8 393 aa20.44■□□□□ 0.86
USP39-204ENST00000409766 SLC12A8A0AV02 714 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 CCDC78A2IDD5 438 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 DRGXA6NNA5 263 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 GOLGA8TH3BQL2 631 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 J3KR12 359 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 NEBLO76041 1014 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 CBX6O95503 412 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 FGF3P11487 239 aaPredicted RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 SERPINB3P29508 390 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 RPL10AP62906 217 aaKnown RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 ARID3BQ8IVW6 561 aaPredicted RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 SLC7A6OSQ96CW6 309 aaPredicted RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 FSD1LQ9BXM9 530 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 SLC25A51Q9H1U9 297 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 CCSER2Q9H7U1 834 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 NSMCE4AQ9NXX6 385 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 CDY1Q9Y6F8 540 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 C2orf71A6NGG8 1288 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 CXCL10P02778 98 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 MPOP05164 745 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 HMBSP08397 361 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 ATF6P18850 670 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 KCNA4P22459 653 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 ABCG1P45844 678 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 CDK18Q07002 472 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 RIPK1Q13546 671 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 HSF5Q4G112 596 aaPredicted RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 CRLF3Q8IUI8 442 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 GIPC2Q8TF65 315 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 PTCD2Q8WV60 388 aaKnown RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 INPP5DQ92835 1189 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 VPS39Q96JC1 886 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 TMEM237Q96Q45 408 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 MRM3Q9HC36 420 aaKnown RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 PAK6Q9NQU5 681 aaPredicted RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 FBXO6Q9NRD1 293 aaPredicted RBP20.43■□□□□ 0.86
USP39-204ENST00000409766 ZNF358Q9NW07 568 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 TRIM17Q9Y577 477 aa20.43■□□□□ 0.86
USP39-204ENST00000409766 SLC38A8A6NNN8 435 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 EFEMP2O95967 443 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 SNCBQ16143 134 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 CCDC153Q494R4 210 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 ACBD5Q5T8D3 534 aaPredicted RBP20.42■□□□□ 0.86
USP39-204ENST00000409766 KDELC1Q6UW63 502 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 CCDC91Q7Z6B0 441 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 CLEC14AQ86T13 490 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 SUGP1Q8IWZ8 645 aaKnown RBP20.42■□□□□ 0.86
USP39-204ENST00000409766 PLD6Q8N2A8 252 aaKnown RBP20.42■□□□□ 0.86
USP39-204ENST00000409766 LRRC43Q8N309 656 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 ACVR1CQ8NER5 493 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 PPHLN1Q8NEY8 458 aaKnown RBP20.42■□□□□ 0.86
USP39-204ENST00000409766 FBXO22Q8NEZ5 403 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 IMP4Q96G21 291 aaKnown RBP20.42■□□□□ 0.86
USP39-204ENST00000409766 UBE2OQ9C0C9 1292 aaKnown RBP20.42■□□□□ 0.86
USP39-204ENST00000409766 CAB39LQ9H9S4 337 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 COPG2Q9UBF2 871 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 TCAF1Q9Y4C2 921 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 MIA3Q5JRA6 1907 aa20.42■□□□□ 0.86
USP39-204ENST00000409766 A0A096LPK6 155 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 ADAM12O43184 909 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 TLR5O60602 858 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 ARCN1P48444 511 aaKnown RBP20.41■□□□□ 0.86
USP39-204ENST00000409766 CSRP3P50461 194 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 CCL23P55773 120 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 WNT3AP56704 352 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 SLC10A7Q0GE19 358 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 DLG2Q15700 870 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 MARC1Q5VT66 337 aa20.41■□□□□ 0.86
USP39-204ENST00000409766 ESRP1Q6NXG1 681 aaKnown RBP20.41■□□□□ 0.86
USP39-204ENST00000409766 ZC3HC1Q86WB0 502 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms