RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ANKRD36A6QL64 1941 aa31.78■■■□□ 2.68
TRAF3IP1-203ENST00000409739 PLXNA2O75051 1894 aa31.78■■■□□ 2.68
TRAF3IP1-203ENST00000409739 ZSCAN5CA6NGD5 496 aaPredicted RBP31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 SOWAHDA6NJG2 315 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 TMEM110-MUSTN1A8MSY1 372 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 CTSLP07711 333 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 CYLC1P35663 651 aaPredicted RBP31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 GJC1P36383 396 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 MAGEA1P43355 309 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 MESDQ14696 234 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 SF3A2Q15428 464 aaKnown RBP31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 NPWQ8N729 165 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 CADM4Q8NFZ8 388 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 FOXJ1Q92949 421 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 CSPG4P5Q96PW8 444 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 SGK2Q9HBY8 427 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 TMEM74BQ9NUR3 256 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 PILRBQ9UKJ0 227 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 FARP1Q9Y4F1 1045 aaPredicted RBP31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 CACNA1EQ15878 2313 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 DOCK9Q9BZ29 2069 aa31.77■■■□□ 2.68
TRAF3IP1-203ENST00000409739 TP53BP1Q12888 1972 aaPredicted RBP31.76■■■□□ 2.68
TRAF3IP1-203ENST00000409739 RNASEH2AO75792 299 aaKnown RBP31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SEMA4FO95754 770 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SFSWAPQ12872 951 aaKnown RBP31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TCEAL1Q15170 157 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PEAR1Q5VY43 1037 aaPredicted RBP31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 AFMIDQ63HM1 303 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TMTC1Q8IUR5 882 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SYT12Q8IV01 421 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ARHGAP12Q8IWW6 846 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 HDDC3Q8N4P3 179 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CHST14Q8NCH0 376 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PIP4K2CQ8TBX8 421 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TSC1Q92574 1164 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 OMDQ99983 421 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SLC39A8Q9C0K1 460 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 FZD4Q9ULV1 537 aa31.76■■■□□ 2.67
TRAF3IP1-203ENST00000409739 C1QTNF3-AMACRE9PGA6 284 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 BUB1O43683 1085 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CHRNA3P32297 505 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 DRD3P35462 400 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 RECQLP46063 649 aaPredicted RBP31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 FAM46CQ5VWP2 391 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TCEAL6Q6IPX3 200 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 DPY19L3Q6ZPD9 716 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SPC24Q8NBT2 197 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 FAM71BQ8TC56 605 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TCEAL3Q969E4 200 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ISG20Q96AZ6 181 aaKnown RBP31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TM6SF2Q9BZW4 377 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PCED1AQ9H1Q7 454 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 NEUROG2Q9H2A3 272 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 C6orf106Q9H6K1 298 aaPredicted RBP31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 IMPACTQ9P2X3 320 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 MFHAS1Q9Y4C4 1052 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PCDHA13Q9Y5I0 950 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PCDH15Q96QU1 1955 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SPTBN4Q9H254 2564 aa31.75■■■□□ 2.67
TRAF3IP1-203ENST00000409739 MEI4A8MW99 385 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 AMPD1P23109 780 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ARHGAP25P42331 645 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 DPP6P42658 865 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ARSEP51690 589 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CDH6P55285 790 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 KRT81Q14533 505 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SPA17Q15506 151 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 POM121L1PQ3SYA9 428 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ATP13A4Q4VNC1 1196 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 NETO2Q8NC67 525 aa31.74■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ARHGAP42A6NI28 874 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 METTL12A8MUP2 240 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PATE3B3GLJ2 98 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PLK4O00444 970 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TMCC1O94876 653 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 NDUFA10O95299 355 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CD48P09326 243 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 HOXD12P35452 270 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 DNA2P51530 1060 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 LMNB2Q03252 620 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CARD16Q5EG05 197 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 SYCP2LQ5T4T6 812 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 DCAF12L1Q5VU92 463 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 GRIN3AQ8TCU5 1115 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 FAM131CQ96AQ9 280 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PDFQ9HBH1 243 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 ETNK2Q9NVF9 386 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 KLHL11Q9NVR0 708 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 RCOR3Q9P2K3 495 aaPredicted RBP31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 IL36AQ9UHA7 158 aa31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 EPN1Q9Y6I3 576 aaPredicted RBP31.73■■■□□ 2.67
TRAF3IP1-203ENST00000409739 FOXD2O60548 495 aaPredicted RBP31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 PAPOLAP51003 745 aaKnown RBP31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CCNHP51946 323 aaPredicted RBP31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 MMRN1Q13201 1228 aa31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 LZTR1Q8N653 840 aa31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 C12orf50Q8NA57 414 aaPredicted RBP31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TMIEQ8NEW7 156 aa31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 CASKIN2Q8WXE0 1202 aa31.72■■■□□ 2.67
TRAF3IP1-203ENST00000409739 TFR2Q9UP52 801 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms