RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ALLCQ8N6M5 410 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 HIST1H2AHQ96KK5 128 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CASD1Q96PB1 797 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 HIST1H2AJQ99878 128 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 H2AFJQ9BTM1 129 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 WHRNQ9P202 907 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CDH22Q9UJ99 828 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 NVLO15381 856 aaKnown RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 ESRRBO95718 433 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 SLC8A1P32418 973 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 IRS1P35568 1242 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 TIE1P35590 1138 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 PBX2P40425 430 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 MAGEA10P43363 369 aaPredicted RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 POLNQ7Z5Q5 900 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CAMK1DQ8IU85 385 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 PSTKQ8IV42 348 aaKnown RBP11.58□□□□□ -0.56
SNX13-202ENST00000409604 UNC5BQ8IZJ1 945 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 ZNF567Q8N184 647 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 MTG2Q9H4K7 406 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 ASB8Q9H765 288 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 CAB39LQ9H9S4 337 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 SYBUQ9NX95 663 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 HS3ST4Q9Y661 456 aa11.58□□□□□ -0.56
SNX13-202ENST00000409604 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3DA0A087WVF3 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3IA0A087WXS9 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3EA0A087X179 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3KA0A087X1G2 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 A0A0U1RQS6 177 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 LOC100653049A0A140TA62 436 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3FA6NER0 549 aaPredicted RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3LB9A6J9 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 KRT34O76011 436 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 METTL18O95568 372 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3HP0C7X1 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 CST5P28325 142 aaPredicted RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 SERPINA4P29622 427 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 CSKP41240 450 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 IMPG1Q17R60 797 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 BRMS1LQ5PSV4 323 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3GQ6DHY5 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3CQ6IPX1 549 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TBC1D3Q8IZP1 549 aaPredicted RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 DEFB119Q8N690 84 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 AZIN2Q96A70 460 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 MLPHQ9BV36 600 aaPredicted RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 TDP1Q9NUW8 608 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 CFAP99D6REC4 459 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 SLC31A1O15431 190 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 FGF10O15520 208 aaPredicted RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 RIPK2O43353 540 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 RNASEH2AO75792 299 aaKnown RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 SERPINH1P50454 418 aaKnown RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 BBS7Q8IWZ6 715 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 ZC3H3Q8IXZ2 948 aaKnown RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 C2orf73Q8N5S3 287 aaPredicted RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 UPF3AQ9H1J1 476 aaKnown RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 TRMT6Q9UJA5 497 aaKnown RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 MYH15Q9Y2K3 1946 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 FANCGO15287 622 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 LCA5LO95447 670 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 BAG2O95816 211 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 MAPK9P45984 424 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 PEX5P50542 639 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 CHI3L2Q15782 390 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 CMC1Q7Z7K0 106 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 PHACTR4Q8IZ21 702 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 STK32AQ8WU08 396 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■■□□ 16.2
SNX13-202ENST00000409604 TCEAL4Q96EI5 215 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 TDRKHQ9Y2W6 561 aaKnown RBP11.57□□□□□ -0.56
SNX13-202ENST00000409604 MAST2Q6P0Q8 1798 aa11.57□□□□□ -0.56
SNX13-202ENST00000409604 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 B4GALT3O60512 393 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 KATNA1O75449 491 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 GMNNO75496 209 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 SEC24AO95486 1093 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 CRTAMO95727 393 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 ITGALP20701 1170 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 FSHRP23945 695 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 PTPN9P43378 593 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 PTPRCAPQ14761 206 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 PARP6Q2NL67 630 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 TEX44Q53QW1 395 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 WDR75Q8IWA0 830 aaKnown RBP11.56□□□□□ -0.56
SNX13-202ENST00000409604 YIPF2Q9BWQ6 316 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 TRIM54Q9BYV2 358 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 LINC00597Q9H2U6 94 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 OGDHLQ9ULD0 1010 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 FZD10Q9ULW2 581 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 CAPN7Q9Y6W3 813 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 DOCK2Q92608 1830 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 CACNA1GO43497 2377 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 GOLGA8QA0A0J9YX86 632 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 TCRBV7S3A2A0A539 114 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 GOLGA8OA6NCC3 632 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 GOLGA8NF8WBI6 632 aa11.56□□□□□ -0.56
SNX13-202ENST00000409604 ABLIM1O14639 778 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms