RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PCOLCE2Q9UKZ9 415 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 SNX11Q9Y5W9 270 aa14.86□□□□□ -0.03
NIF3L1-205ENST00000409588 TPRP12270 2363 aaKnown RBP14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 MT-CO1P00395 513 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 VAV1P15498 845 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 GRK6P43250 576 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 CCT8P50990 548 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 HDAC4P56524 1084 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 CNTN1Q12860 1018 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 STAT4Q14765 748 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 CDO1Q16878 200 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 SETMARQ53H47 684 aaPredicted RBP14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 ARTNQ5T4W7 220 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 MANEALQ5VSG8 457 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 DNAJC24Q6P3W2 148 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 DCUN1D2Q6PH85 259 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 MCOLN2Q8IZK6 566 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 JOSD2Q8TAC2 188 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 RHBDD1Q8TEB9 315 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 CASKIN2Q8WXE0 1202 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 TBC1D31Q96DN5 1066 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 IQCDQ96DY2 449 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 SERAC1Q96JX3 654 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 CNPY3Q9BT09 278 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 AASDHPPTQ9NRN7 309 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 PARVAQ9NVD7 372 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 IL36AQ9UHA7 158 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 SARDHQ9UL12 918 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 MSRB2Q9Y3D2 182 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 ADAMTS9Q9P2N4 1935 aa14.85□□□□□ -0.03
NIF3L1-205ENST00000409588 A0A1B0GTH6 734 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 SPAARA0A1B0GVQ0 90 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 TCRBV5S1A1TA0A578 114 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 PRAMEF26H0Y7S4 382 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 TLR4O00206 839 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 SNAP91O60641 907 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 ZMPSTE24O75844 475 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 PROS1P07225 676 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 CDK4P11802 303 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 ARRB1P49407 418 aaPredicted RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 SERPINH1P50454 418 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 YBEYP58557 167 aaPredicted RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 KLHL40Q2TBA0 621 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 CARD16Q5EG05 197 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 FIGNQ5HY92 759 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 EFHC2Q5JST6 749 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 PPP1R15BQ5SWA1 713 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 AGBL4Q5VU57 503 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 RWDD4Q6NW29 188 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 CAVIN1Q6NZI2 390 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 NLRP14Q86W24 1093 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 ADAMTS14Q8WXS8 1223 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 ELF4Q99607 663 aaPredicted RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 HEPHQ9BQS7 1158 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 SCNM1Q9BWG6 230 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 IL21RQ9HBE5 538 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 GDF3Q9NR23 364 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 TMPRSS4Q9NRS4 437 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 ARHGAP20Q9P2F6 1191 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 LHX6Q9UPM6 363 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 FNDC3AQ9Y2H6 1198 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 SNX10Q9Y5X0 201 aa14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 BZW2Q9Y6E2 419 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-205ENST00000409588 A0A1B0GTQ1 180 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 A0A1W2PR77 199 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 KPNA3O00505 521 aaPredicted RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 TEX33O43247 280 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 RAMP2O60895 175 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 RTN2O75298 545 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 LRIG2O94898 1065 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 RRM1P23921 792 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 PRKCIP41743 596 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 RXRGP48443 463 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 NR1I3Q14994 352 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 POLD3Q15054 466 aaPredicted RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 ST3GAL2Q16842 350 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 INO80DQ53TQ3 878 aaPredicted RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 SFMBT2Q5VUG0 894 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 C22orf39Q6P5X5 142 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 ERN2Q76MJ5 926 aaKnown RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 RAB44Q7Z6P3 723 aaPredicted RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 DRC7Q8IY82 874 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 OR7D4Q8NG98 312 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 BAHD1Q8TBE0 780 aaPredicted RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 BAP1Q92560 729 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 ARHGEF2Q92974 986 aaKnown RBP14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 EPAS1Q99814 870 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 CATSPERBQ9H7T0 1116 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 EBF2Q9HAK2 575 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 PCDHGA4Q9Y5G9 962 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 NUMA1Q14980 2115 aa14.83□□□□□ -0.04
NIF3L1-205ENST00000409588 WASH4PA8MWX3 477 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 H0Y8X5 98 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 K7ERQ8 282 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 FGF10O15520 208 aaPredicted RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 SMAD6O43541 496 aaKnown RBP14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 TNFSF14O43557 240 aa14.82□□□□□ -0.04
NIF3L1-205ENST00000409588 KDELR3O43731 214 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms