RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ARHGAP6O43182 974 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 BNIP3LO60238 219 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 GFRA3O60609 400 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 ADH1BP00325 375 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 KDELR1P24390 212 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 CD6P30203 668 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 RECQLP46063 649 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 SFSWAPQ12872 951 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 ANKRD20A8PQ5CZ79 823 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 PMS2CLQ68D20 193 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 VSIG1Q86XK7 387 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 PLPP6Q8IY26 295 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 FAF2Q96CS3 445 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 TNKS2Q9H2K2 1166 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 FCF1Q9Y324 198 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 MFHAS1Q9Y4C4 1052 aa20.23■□□□□ 0.83
PDLIM2-207ENST00000409417 LRRD1A4D1F6 860 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 DFFAO00273 331 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 PRAMEF11O60813 436 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 IL1BP01584 269 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 SLC8A1P32418 973 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 SERPINB6P35237 376 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 NAP1L1P55209 391 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 RPL6Q02878 288 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 KIF5AQ12840 1032 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 LEKR1Q6ZMV7 388 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 USP30Q70CQ3 517 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 LPCAT2Q7L5N7 544 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 DAAM2Q86T65 1068 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 PCDH19Q8TAB3 1148 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 TOE1Q96GM8 510 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 GOLPH3Q9H4A6 298 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 PDFQ9HBH1 243 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 DDX56Q9NY93 547 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 WSB2Q9NYS7 404 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 GMEB2Q9UKD1 530 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 ZNF292O60281 2723 aa20.22■□□□□ 0.83
PDLIM2-207ENST00000409417 PLXND1Q9Y4D7 1925 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 ZNF487B1APH4 448 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 MID1O15344 667 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 PSTPIP1O43586 416 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 TMCC1O94876 653 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 RETP07949 1114 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 C5AR1P21730 350 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 CHRNA3P32297 505 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 PSMD8P48556 350 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 DNA2P51530 1060 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 CARD16Q5EG05 197 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 FAM46CQ5VWP2 391 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 DPY19L3Q6ZPD9 716 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 NETO2Q8NC67 525 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 RUBCNQ92622 972 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 FBXL12Q9NXK8 326 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 ADGRG1Q9Y653 693 aa20.21■□□□□ 0.83
PDLIM2-207ENST00000409417 C3orf70A6NLC5 250 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 J3KR12 359 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 NDUFS2O75306 463 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 TNNT1P13805 278 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 TP53INP2Q8IXH6 220 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 TMIEQ8NEW7 156 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 NCDNQ9UBB6 729 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 UBA2Q9UBT2 640 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 IPO11Q9UI26 975 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 SARDHQ9UL12 918 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 NCKAP1Q9Y2A7 1128 aa20.2■□□□□ 0.82
PDLIM2-207ENST00000409417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 GSRP00390 522 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 PRNPP04156 253 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 KRT1P04264 644 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 PAFAH1B3Q15102 231 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 IFI16Q16666 785 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 ODF2Q5BJF6 829 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 FAM124AQ86V42 546 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 LRRC49Q8IUZ0 686 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 TMEFF1Q8IYR6 380 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 AADATQ8N5Z0 425 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 PQLC3Q8N755 202 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 CHST14Q8NCH0 376 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 KIAA1524Q8TCG1 905 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 GANCQ8TET4 914 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 RNF157Q96PX1 679 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 TM6SF2Q9BZW4 377 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 SP110Q9HB58 689 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 FZD4Q9ULV1 537 aa20.19■□□□□ 0.82
PDLIM2-207ENST00000409417 A0A1W2PP55 124 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 C1QTNF3-AMACRE9PGA6 284 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 NRDCO43847 1150 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 RNASEH2AO75792 299 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 CTSLP07711 333 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 CCNHP51946 323 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 SNRPD1P62314 119 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 IL10RBQ08334 325 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 NCBP2-AS2Q69YL0 99 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ARHGAP36Q6ZRI8 547 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ALYREFQ86V81 257 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 LRRC57Q8N9N7 239 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 OR2AP1Q8NGE2 309 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 PIP4K2CQ8TBX8 421 aa20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-207ENST00000409417 ZNF419Q96HQ0 510 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms