RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 INIPQ9NRY2 104 aa13.18□□□□□ -0.3
PTPRN-202ENST00000409251 GMPR2Q9P2T1 348 aaKnown RBP13.18□□□□□ -0.3
PTPRN-202ENST00000409251 BCAP29Q9UHQ4 241 aa13.18□□□□□ -0.3
PTPRN-202ENST00000409251 SLC39A10Q9ULF5 831 aa13.18□□□□□ -0.3
PTPRN-202ENST00000409251 S100BP04271 92 aaPredicted RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 SERPINE1P05121 402 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 DHRS4L1P0CG22 281 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 UGT1A1P22309 533 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 UGT1A4P22310 534 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 UGT1A3P35503 534 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 UGT1A5P35504 534 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 MAP2K5Q13163 448 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 GRB14Q14449 540 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ZIK1Q3SY52 487 aaPredicted RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ZNF484Q5JVG2 852 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 GK5Q6ZS86 529 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 RELL1Q8IUW5 271 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ACTRT2Q8TDY3 377 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 DDI1Q8WTU0 396 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 MRPL45Q9BRJ2 306 aaKnown RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 GPATCH1Q9BRR8 931 aaKnown RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ELOVL4Q9GZR5 314 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ADNPQ9H2P0 1102 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 DPEP3Q9H4B8 488 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 TIMMDC1Q9NPL8 285 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 CDH23Q9H251 3354 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 FAM189A1O60320 539 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 GPC4O75487 556 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 GNAO1P09471 354 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ASPAP45381 313 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 PLIN5Q00G26 463 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 SLC18A2Q05940 514 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 BFSP2Q13515 415 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 OTUD3Q5T2D3 398 aaPredicted RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ENOSF1Q7L5Y1 443 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 C12orf43Q96C57 262 aaKnown RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 NOD1Q9Y239 953 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 EFR3BQ9Y2G0 817 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 IGKV6-21A0A0C4DH24 114 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 H3BNX3 289 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 LCP1P13796 627 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 TPH1P17752 444 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 AOC1P19801 751 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ME2P23368 584 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 FLT3LGP49771 235 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ABCE1P61221 599 aaKnown RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
PTPRN-202ENST00000409251 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 CYP2A13Q16696 494 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 TMCO5AQ8N6Q1 288 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 BPIFB6Q8NFQ5 453 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 HPS1Q92902 700 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 PLGRKTQ9HBL7 147 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 XPNPEP3Q9NQH7 507 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 DAPK2Q9UIK4 370 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 TEX264Q9Y6I9 313 aa13.17□□□□□ -0.3
PTPRN-202ENST00000409251 DYTNA2CJ06 578 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 A6NL46 340 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 METTL18O95568 372 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 TBXAS1P24557 533 aaPredicted RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 IRF9Q00978 393 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 CEACAM7Q14002 265 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 RGMBQ6NW40 437 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 MAVSQ7Z434 540 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 WDTC1Q8N5D0 677 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 RXFP2Q8WXD0 754 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 TNFSF13BQ9Y275 285 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 ST14Q9Y5Y6 855 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 ZNFX1Q9P2E3 1918 aaKnown RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 NRP1O14786 923 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 PARNO95453 639 aaKnown RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 LTFP02788 710 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 GSTT2P0CG29 244 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 GSTT2BP0CG30 244 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 HOXD12P35452 270 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 NKX2-5P52952 324 aaPredicted RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 BBS12Q6ZW61 710 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 FAM149B1Q96BN6 582 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 ZNF669Q96BR6 464 aaPredicted RBP13.16□□□□□ -0.3
PTPRN-202ENST00000409251 SLC29A1Q99808 456 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
PTPRN-202ENST00000409251 KCNU1A8MYU2 1149 aa13.15□□□□□ -0.3
PTPRN-202ENST00000409251 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
PTPRN-202ENST00000409251 CCNT2O60583 730 aaKnown RBP13.15□□□□□ -0.3
PTPRN-202ENST00000409251 PIGNO95427 931 aa13.15□□□□□ -0.3
PTPRN-202ENST00000409251 APOC2P02655 101 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms