RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 EMCNQ9ULC0 261 aa12.08□□□□□ -0.47
PCNX4-204ENST00000406949 LRCH1Q9Y2L9 728 aa12.08□□□□□ -0.47
PCNX4-204ENST00000406949 PTCH2Q9Y6C5 1203 aa12.08□□□□□ -0.47
PCNX4-204ENST00000406949 LCTP09848 1927 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 MAGEB16A2A368 324 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF487B1APH4 448 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 HNRNPLP14866 589 aaKnown RBP eCLIP12.08□□□□□ -0.482e-9■□□□□ 10.6
PCNX4-204ENST00000406949 PMLP29590 882 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 MAGEA3P43357 314 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 GEMP55040 296 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 DSG1Q02413 1049 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 GDF6Q6KF10 455 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 GLB1LQ6UWU2 654 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 RAB3IL1Q8TBN0 382 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 SH3TC2Q8TF17 1288 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 HDAC11Q96DB2 347 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 MLPHQ9BV36 600 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 IPO11Q9UI26 975 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 GNEQ9Y223 722 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 UBA6A0AVT1 1052 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 TTC24A2A3L6 582 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 ERI2A8K979 691 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 DDHD2O94830 711 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 CDK7P50613 346 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 PURAQ00577 322 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 TAF12Q16514 161 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 LDB1Q86U70 411 aaPredicted RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 ACVR1CQ8NER5 493 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 ZMIZ2Q8NF64 920 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 BLOC1S5Q8TDH9 187 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 PDCD6IPQ8WUM4 868 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 KCTD13Q8WZ19 329 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 PANX3Q96QZ0 392 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 SERPINI1Q99574 410 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 AGO3Q9H9G7 860 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 TMEM30AQ9NV96 361 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 RRN3Q9NYV6 651 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 STX18Q9P2W9 335 aaKnown RBP12.08□□□□□ -0.48
PCNX4-204ENST00000406949 PARP14Q460N5 1801 aa12.08□□□□□ -0.48
PCNX4-204ENST00000406949 F8W810 466 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 TADA2AO75478 443 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 AMHP03971 560 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 PIRTP0C851 137 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF865P0CJ78 1059 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 COX4I1P13073 169 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SLC5A3P53794 718 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SLC12A1Q13621 1099 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 ARL13AQ5H913 290 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SH2D4BQ5SQS7 431 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 C10orf120Q5SQS8 335 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 TMEM198Q66K66 360 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 NET1Q7Z628 596 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 IFT43Q96FT9 208 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 RPRD1AQ96P16 312 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SLC2A13Q96QE2 648 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SLC9A7Q96T83 725 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 VAT1Q99536 393 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 TSC22D3Q99576 134 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CDH19Q9H159 772 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SLC2A6Q9UGQ3 507 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 USP3Q9Y6I4 520 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 FYNP06241 537 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CD151P48509 253 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 KPNA2P52292 529 aaKnown RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 MGAT5BQ3V5L5 792 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 MAP3K21Q5TCX8 1036 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 STEAP4Q687X5 459 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 TIFABQ6ZNK6 161 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SPNS2Q8IVW8 549 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 OR52B2Q96RD2 323 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 ZFYVE28Q9HCC9 887 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF212Q9UDV6 495 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 ADAM28Q9UKQ2 775 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 NEMP2A6NFY4 417 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 PSMD3O43242 534 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SNNO75324 88 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 SORBS2O94875 1100 aaKnown RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 GNAZP19086 355 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 LRPAP1P30533 357 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CD68P34810 354 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CA8P35219 290 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 CD86P42081 329 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 NME5P56597 212 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 RPS6KA2Q15349 733 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 INTS6LQ5JSJ4 861 aaKnown RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 PCID2Q5JVF3 399 aa12.07□□□□□ -0.48
PCNX4-204ENST00000406949 OTUD1Q5VV17 481 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-204ENST00000406949 LPCAT4Q643R3 524 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms