RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SLC27A6Q9Y2P4 619 aa20.85■□□□□ 0.93
CHKB-201ENST00000406938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.84■□□□□ 0.93
CHKB-201ENST00000406938 CD160O95971 181 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 NFKB1P19838 968 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 PSMB4P28070 264 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 OPRD1P41143 372 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 CTSOP43234 321 aaPredicted RBP20.84■□□□□ 0.93
CHKB-201ENST00000406938 DRG2P55039 364 aaKnown RBP20.84■□□□□ 0.93
CHKB-201ENST00000406938 VSNL1P62760 191 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 KDSRQ06136 332 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 MESP2Q0VG99 397 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 DMC1Q14565 340 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 ZNF235Q14590 738 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 RFTN1Q14699 578 aaPredicted RBP20.84■□□□□ 0.93
CHKB-201ENST00000406938 IZUMO3Q5VZ72 239 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 TMEM215Q68D42 235 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 ITPRIPL1Q6GPH6 555 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 GRAMD4Q6IC98 578 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 RETSATQ6NUM9 610 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 SLC44A3Q8N4M1 653 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 IFT81Q8WYA0 676 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 NT5MQ9NPB1 228 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 FAM114A2Q9NRY5 505 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 RSPH14Q9UHP6 348 aa20.84■□□□□ 0.93
CHKB-201ENST00000406938 DNALI1O14645 258 aaPredicted RBP20.83■□□□□ 0.93
CHKB-201ENST00000406938 CARSP49589 748 aaKnown RBP20.83■□□□□ 0.93
CHKB-201ENST00000406938 WDR93Q6P2C0 686 aa20.83■□□□□ 0.93
CHKB-201ENST00000406938 CSGALNACT1Q8TDX6 532 aa20.83■□□□□ 0.93
CHKB-201ENST00000406938 ETNK1Q9HBU6 452 aa20.83■□□□□ 0.93
CHKB-201ENST00000406938 WHRNQ9P202 907 aa20.83■□□□□ 0.93
CHKB-201ENST00000406938 KIAA1549LQ6ZVL6 1849 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 TMCC1O94876 653 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 MT-CO1P00395 513 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 SOX9P48436 509 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 SERPINH1P50454 418 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 GEMIN4P57678 1058 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 CALCOCO2Q13137 446 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 CUL1Q13616 776 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 PARP6Q2NL67 630 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 RNASEH2BQ5TBB1 312 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 MBLAC2Q68D91 279 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 PHTF2Q8N3S3 785 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 PGBD5Q8N414 524 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHKB-201ENST00000406938 WFIKKN2Q8TEU8 576 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 CPT1BQ92523 772 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 GORASP1Q9BQQ3 440 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 CINPQ9BW66 212 aaPredicted RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 SEPT3Q9UH03 358 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 TPX2Q9ULW0 747 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 ATP8A1Q9Y2Q0 1164 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 LOC730098B7Z3J9 87 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 MUSKO15146 869 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 TP73O15350 636 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 POLR2EP19388 210 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 TNFRSF8P28908 595 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 FDFT1P37268 417 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 EIF2DP41214 584 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 STK19P49842 368 aaPredicted RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 ITGA8P53708 1063 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 MAXP61244 160 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 SULT2A1Q06520 285 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 INO80DQ53TQ3 878 aaPredicted RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 BBS5Q8N3I7 341 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 TSEN2Q8NCE0 465 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 BBOF1Q8ND07 529 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 TTC17Q96AE7 1141 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 RPL10LQ96L21 214 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 GLOD4Q9HC38 313 aa20.82■□□□□ 0.92
CHKB-201ENST00000406938 FCF1Q9Y324 198 aaKnown RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 FARP1Q9Y4F1 1045 aaPredicted RBP20.82■□□□□ 0.92
CHKB-201ENST00000406938 TICRRQ7Z2Z1 1910 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 CXorf51AA0A1B0GTR3 108 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.81■□□□□ 0.92
CHKB-201ENST00000406938 K7ERQ8 282 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 COL4A2P08572 1712 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 ITIH2P19823 946 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 ECHS1P30084 290 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 ECT2LQ008S8 904 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 SEMA5AQ13591 1074 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 HLTFQ14527 1009 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHKB-201ENST00000406938 CYTH1Q15438 398 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 SYCP2LQ5T4T6 812 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 ZDHHC24Q6UX98 284 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 PPIL6Q8IXY8 311 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 GSPT2Q8IYD1 628 aaKnown RBP20.81■□□□□ 0.92
CHKB-201ENST00000406938 TERB1Q8NA31 727 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 PSKH2Q96QS6 385 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 MGME1Q9BQP7 344 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 CIPCQ9C0C6 399 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 NEUROG2Q9H2A3 272 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 SLC25A13Q9UJS0 675 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 RAB21Q9UL25 225 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 NFU1Q9UMS0 254 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 HS3ST2Q9Y278 367 aa20.81■□□□□ 0.92
CHKB-201ENST00000406938 MYBL2P10244 700 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 MCM3P25205 808 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 PLTPP55058 493 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 ITKQ08881 620 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 KCNJ11Q14654 390 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms