RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
PSEN1-205ENST00000406768 PCDHB18PQ96TA0 734 aa9.2□□□□□ -0.94
PSEN1-205ENST00000406768 TEKT3Q9BXF9 490 aa9.2□□□□□ -0.94
PSEN1-205ENST00000406768 RBM38Q9H0Z9 239 aaKnown RBP9.2□□□□□ -0.94
PSEN1-205ENST00000406768 RSAD1Q9HA92 442 aa9.2□□□□□ -0.94
PSEN1-205ENST00000406768 NGRNQ9NPE2 291 aaKnown RBP9.2□□□□□ -0.94
PSEN1-205ENST00000406768 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
PSEN1-205ENST00000406768 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-205ENST00000406768 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-205ENST00000406768 A8MV72 311 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 E5RJQ4 531 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 MTA2O94776 668 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 CLIC3O95833 236 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 C8BP07358 591 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FAM86B2P0C5J1 330 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 RECQLP46063 649 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SLC7A2P52569 658 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FMO1Q01740 532 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 RHDQ02161 417 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 KCNA1Q09470 495 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 OXA1LQ15070 435 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FUT11Q495W5 492 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 BOLA3Q53S33 107 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 XKR9Q5GH70 373 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 COLEC12Q5KU26 742 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 DNAJC10Q8IXB1 793 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SMG8Q8ND04 991 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 ASB9Q96DX5 294 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 CENPNQ96H22 339 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SETDB2Q96T68 719 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 WDR11Q9BZH6 1224 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SIX2Q9NPC8 291 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SAE1Q9UBE0 346 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 KCNN3Q9UGI6 736 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FBXO40Q9UH90 709 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 VANGL2Q9ULK5 521 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 DLG5Q8TDM6 1919 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 NR5A2O00482 541 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TPP1O14773 563 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TGM2P21980 687 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 GRK3P35626 688 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 RAD51Q06609 339 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 ENPEPQ07075 957 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 USP10Q14694 798 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 PDZK1Q5T2W1 519 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 PRMT9Q6P2P2 845 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 ZNF773Q6PK81 442 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SCML4Q8N228 414 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FAM109AQ8N4B1 249 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 CNTD1Q8N815 330 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TFB1MQ8WVM0 346 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 DHX38Q92620 1227 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 NODALQ96S42 347 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 DHRS9Q9BPW9 319 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TTYH2Q9BSA4 534 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 ELOVL6Q9H5J4 265 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 FAM49BQ9NUQ9 324 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 NUDT5Q9UKK9 219 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 OR6C70A6NIJ9 312 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 STX16-NPEPL1H3BU86 382 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 MSI1O43347 362 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SULT1C4O75897 302 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 POLBP06746 335 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 PTPN1P18031 435 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 CCNCP24863 283 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 AP3M2P53677 418 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TAGLNQ01995 201 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TNK2Q07912 1038 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 NIPAL4Q0D2K0 466 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 DMC1Q14565 340 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 QPRTQ15274 297 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 LSM12Q3MHD2 195 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 RBM20Q5T481 1227 aaKnown RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 STYK1Q6J9G0 422 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 HMBOX1Q6NT76 420 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 CCBE1Q6UXH8 406 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 THNSL1Q8IYQ7 743 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 TBC1D21Q8IYX1 336 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SPARTQ8N0X7 666 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 EMC1Q8N766 993 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SLITRK1Q96PX8 696 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 APBA2Q99767 749 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 ISCA1Q9BUE6 129 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 NPLQ9BXD5 320 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-205ENST00000406768 AMNQ9BXJ7 453 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 UNC93B1Q9H1C4 597 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 SLA2Q9H6Q3 261 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 RIC8BQ9NVN3 520 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 MKS1Q9NXB0 559 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 CNTNAP2Q9UHC6 1331 aa9.19□□□□□ -0.94
PSEN1-205ENST00000406768 AHDC1Q5TGY3 1603 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-205ENST00000406768 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
PSEN1-205ENST00000406768 EI24O14681 340 aa9.18□□□□□ -0.94
PSEN1-205ENST00000406768 PSKH1P11801 424 aa9.18□□□□□ -0.94
PSEN1-205ENST00000406768 IVDP26440 423 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms