RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 SCYL1Q96KG9 808 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 APBA2Q99767 749 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 NUF2Q9BZD4 464 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 ZNF385DQ9H6B1 395 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 UBP1Q9NZI7 540 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 G3BP2Q9UN86 482 aaKnown RBP18.76■□□□□ 0.59
EWSR1-207ENST00000406548 IPPQ9Y573 584 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 MBLAC1A4D2B0 266 aaPredicted RBP18.76■□□□□ 0.59
EWSR1-207ENST00000406548 AP3B1O00203 1094 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 GABRDO14764 452 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 GLRBP48167 497 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 THOP1P52888 689 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 FOLH1Q04609 750 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 CYLC2Q14093 348 aaPredicted RBP18.76■□□□□ 0.59
EWSR1-207ENST00000406548 PRPSAP1Q14558 356 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 GPRIN1Q7Z2K8 1008 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 TMC7Q7Z402 723 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 LCA5Q86VQ0 697 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 EPAS1Q99814 870 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 SYT17Q9BSW7 474 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 KIFC1Q9BW19 673 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 CRTAC1Q9NQ79 661 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 VTI1BQ9UEU0 232 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 ZDHHC2Q9UIJ5 367 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 VPS28Q9UK41 221 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 CDYLQ9Y232 598 aa18.76■□□□□ 0.59
EWSR1-207ENST00000406548 CCDC78A2IDD5 438 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 CAPN8A6NHC0 703 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 DDHD2O94830 711 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 SLC35E2BP0CK96 405 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 TFEBP19484 476 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 LRPAP1P30533 357 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 AVPR1AP37288 418 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 GRIA2P42262 883 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 CHN2P52757 468 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 NSUN2Q08J23 767 aaKnown RBP eCLIP18.75■□□□□ 0.59
EWSR1-207ENST00000406548 UGT2A3Q6UWM9 527 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 STYXQ8WUJ0 223 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 KCTD4Q8WVF5 259 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 DNAJB3Q8WWF6 145 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 RCN3Q96D15 328 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 DCUN1D1Q96GG9 259 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 SNX10Q9Y5X0 201 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 NUP205Q92621 2012 aa18.75■□□□□ 0.59
EWSR1-207ENST00000406548 SLCO1B7G3V0H7 640 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 STRNO43815 780 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 AP1G2O75843 785 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 JCHAINP01591 159 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 USP17L7P0C7H9 530 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 PABPC4LP0CB38 370 aaKnown RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 DNAJB2P25686 324 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 ADSLP30566 484 aaPredicted RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 PGGT1BP53609 377 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 NAGLUP54802 743 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 SLC12A1Q13621 1099 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 FLOT2Q14254 428 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 PPP2R5DQ14738 602 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 HERC3Q15034 1050 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 ZNF423Q2M1K9 1284 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 PIGGQ5H8A4 983 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 FAM35AQ86V20 835 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 SMG8Q8ND04 991 aaKnown RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 DPF3Q92784 378 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 CATSPER2Q96P56 530 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 GCNAQ96QF7 691 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 CDRT15Q96T59 188 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 SMOQ99835 787 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 COLEC11Q9BWP8 271 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 DMAP1Q9NPF5 467 aaPredicted RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 RNF181Q9P0P0 153 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 RUVBL2Q9Y230 463 aaKnown RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 C15orf38-AP3S2A0A0A6YYH1 394 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 AP1G1O43747 822 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 F2P00734 622 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.595e-9■■□□□ 12.8
EWSR1-207ENST00000406548 ZNF135P52742 658 aaPredicted RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 LRRC8EQ6NSJ5 796 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 ARPINQ7Z6K5 226 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 CTU1Q7Z7A3 348 aaKnown RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 DPP9Q86TI2 863 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 LINC00523Q86TU6 105 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 SLC41A1Q8IVJ1 513 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 CENPLQ8N0S6 344 aaPredicted RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 PGAM4Q8N0Y7 254 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 FSTL5Q8N475 847 aaPredicted RBP18.74■□□□□ 0.59
EWSR1-207ENST00000406548 MAML3Q96JK9 1138 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 SLC4A7Q9Y6M7 1214 aa18.74■□□□□ 0.59
EWSR1-207ENST00000406548 FAM163BP0C2L3 166 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 COL6A2P12110 1019 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 XRCC1P18887 633 aaPredicted RBP18.73■□□□□ 0.59
EWSR1-207ENST00000406548 MRPS22P82650 360 aaKnown RBP18.73■□□□□ 0.59
EWSR1-207ENST00000406548 RARS2Q5T160 578 aaKnown RBP18.73■□□□□ 0.59
EWSR1-207ENST00000406548 TMEM198Q66K66 360 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 ZFP1Q6P2D0 407 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 LSMEM2Q8N112 164 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 ZMIZ2Q8NF64 920 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 ZSCAN18Q8TBC5 510 aaPredicted RBP18.73■□□□□ 0.59
EWSR1-207ENST00000406548 TKTL2Q9H0I9 626 aa18.73■□□□□ 0.59
EWSR1-207ENST00000406548 ABHD16BQ9H3Z7 469 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms