RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 AIMP2Q13155 320 aaKnown RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF169Q14929 603 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 EDRF1Q3B7T1 1238 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 C5orf22Q49AR2 442 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC9B1Q4ZJI4 515 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 VWA5B1Q5TIE3 1220 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 TMEM268Q5VZI3 342 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ATG9BQ674R7 924 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 SARM1Q6SZW1 724 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 IL20RBQ6UXL0 311 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 RTL10Q7L3V2 364 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 KRT74Q7RTS7 529 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 GSTA5Q7RTV2 222 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 MDGA2Q7Z553 956 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 TAGAPQ8N103 731 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 CNTROBQ8N137 903 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 PAQR4Q8N4S7 273 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 SCAIQ8N9R8 606 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 SETD9Q8NE22 299 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 CAGE1Q8TC20 777 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZFPM2Q8WW38 1151 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ARHGEF2Q92974 986 aaKnown RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 CALML4Q96GE6 196 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ADAD1Q96M93 576 aaKnown RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 KLHL15Q96M94 604 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 PIP5K1AQ99755 562 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 MAK16Q9BXY0 300 aaKnown RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 SMARCAD1Q9H4L7 1026 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 TXNRD2Q9NNW7 524 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ASIC5Q9NY37 505 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ADD3Q9UEY8 706 aaKnown RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 CLDN16Q9Y5I7 305 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 SAMD9Q5K651 1589 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 WDR62O43379 1518 aa5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF608Q9ULD9 1512 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P18-201ENST00000406327 FGD6Q6ZV73 1430 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 KIF21AQ7Z4S6 1674 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 PASKQ96RG2 1323 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 A0A1W2PQM1 296 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 hCG_1807616A0A1W2PRN6 198 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SYNDIG1LA6NDD5 238 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 LIPT2A6NK58 231 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 LRRC53A6NM62 1247 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 MYO1GB0I1T2 1018 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 EIF3CLB5ME19 914 aaKnown RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 KCNJ18B7U540 433 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 HNRNPCL1O60812 293 aaKnown RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF202O95125 648 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SERPINC1P01008 464 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 HNRNPCP07910 306 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 CSH1P0DML2 217 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 CSH2P0DML3 217 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 PORP16435 677 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 ATF7P17544 494 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 TACR3P29371 465 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 TM4SF1P30408 202 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 RGS2P41220 211 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 CYP2J2P51589 502 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC14A1Q13336 389 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SEMA3AQ14563 771 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 KPNB1Q14974 876 aaKnown RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 DPCR1Q3MIW9 517 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 FAM171A1Q5VUB5 890 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF474Q6S9Z5 364 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 C17orf99Q6UX52 265 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC46A3Q7Z3Q1 461 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 RNF144BQ7Z419 303 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 RASAL3Q86YV0 1011 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 RFX6Q8HWS3 928 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SRBD1Q8N5C6 995 aaKnown RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 AMER2Q8N7J2 671 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 FRMD1Q8N878 549 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 CADM4Q8NFZ8 388 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 INTS12Q96CB8 462 aaKnown RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 MAP7D2Q96T17 732 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 H2AFJQ9BTM1 129 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SH2D4AQ9H788 454 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 BABAM1Q9NWV8 329 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 FOXJ2Q9P0K8 574 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 KIAA1456Q9P272 454 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 SLC17A6Q9P2U8 582 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 IPO11Q9UI26 975 aaKnown RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF215Q9UL58 517 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 EPN1Q9Y6I3 576 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 KIAA0586Q9BVV6 1533 aa5.06□□□□□ -1.6
HMGB3P18-201ENST00000406327 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 TMEM191CA6NGB0 347 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 C1QTNF3-AMACRE9PGA6 284 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 CBX6O95503 412 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 ADAP00813 363 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 IL1AP01583 271 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 EIF2S1P05198 315 aaKnown RBP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 GALTP07902 379 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 WT1P19544 449 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 CHRNA5P30532 468 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 ADRA1BP35368 520 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 CLK3P49761 638 aaKnown RBP5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 SNX16P57768 344 aa5.05□□□□□ -1.6
HMGB3P18-201ENST00000406327 NLRP5P59047 1200 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms