RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 EPB41L1Q9H4G0 881 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 STN1Q9H668 368 aaKnown RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 TNFRSF12AQ9NP84 129 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 BFARQ9NZS9 450 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 AKT3Q9Y243 479 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 RBMX2Q9Y388 322 aaKnown RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 NME7Q9Y5B8 376 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 FAM72CH0Y354 149 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 ACOT8O14734 319 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 ZBTB24O43167 697 aaPredicted RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 BCAS2O75934 225 aaPredicted RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 KCNH1O95259 989 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CHRM3P20309 590 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CASP2P42575 452 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 NDUFV1P49821 464 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 BACE1P56817 501 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CAPRIN1Q14444 709 aaKnown RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 TMEM132DQ14C87 1099 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 CCDC153Q494R4 210 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 FAM72AQ5TYM5 149 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 FAM72DQ6L9T8 149 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 TMEM26Q6ZUK4 368 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 GPR141Q7Z602 305 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 FAM72BQ86X60 149 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 DEFB106AQ8N104 65 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 QKIQ96PU8 341 aaKnown RBP eCLIP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 HAUS8Q9BT25 410 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 TEX13BQ9BXU2 312 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 PDGFDQ9GZP0 370 aaPredicted RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 TIMMDC1Q9NPL8 285 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 OXSMQ9NWU1 459 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 DPP3Q9NY33 737 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 PRPF19Q9UMS4 504 aaKnown RBP9.71□□□□□ -0.85
SMC1B-202ENST00000404354 PTGDR2Q9Y5Y4 395 aa9.71□□□□□ -0.85
SMC1B-202ENST00000404354 DLX3O60479 287 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 B4GALT4O60513 344 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 ALDH1A2O94788 518 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 PIM1P11309 404 aaPredicted RBP9.71□□□□□ -0.86
SMC1B-202ENST00000404354 NCAM1P13591 858 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 EEF1B2P24534 225 aaKnown RBP9.71□□□□□ -0.86
SMC1B-202ENST00000404354 SULT1E1P49888 294 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 SLC7A2P52569 658 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 GNA12Q03113 381 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 MAP7D1Q3KQU3 841 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 C16orf87Q6PH81 154 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 ELMSAN1Q6PJG2 1045 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 TICAM1Q8IUC6 712 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 SNX29P2Q8IUI4 249 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 CHERPQ8IWX8 916 aaKnown RBP9.71□□□□□ -0.86
SMC1B-202ENST00000404354 RNF168Q8IYW5 571 aaPredicted RBP9.71□□□□□ -0.86
SMC1B-202ENST00000404354 FIBCD1Q8N539 461 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 CPNE1Q99829 537 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 RAP2CQ9Y3L5 183 aa9.71□□□□□ -0.86
SMC1B-202ENST00000404354 MTF2Q9Y483 593 aaPredicted RBP9.71□□□□□ -0.86
SMC1B-202ENST00000404354 CLDN5O00501 218 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ACKR2O00590 384 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 APBA3O96018 575 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 MCF2P10911 925 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ACAT1P24752 427 aaKnown RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 LIMK2P53671 638 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CDK18Q07002 472 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CXCL9Q07325 125 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 GEN1Q17RS7 908 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ARHGAP17Q68EM7 881 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CHSY3Q70JA7 882 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 SPPL2CQ8IUH8 684 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 PARP8Q8N3A8 854 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 SPATA22Q8NHS9 363 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 C18orf25Q96B23 403 aaPredicted RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ZBTB26Q9HCK0 441 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 SH3GLB1Q9Y371 365 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 LOXHD1Q8IVV2 1947 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CCL22O00626 93 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 AURKAO14965 403 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 HTRA2O43464 458 aaPredicted RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ZBTB11O95625 1053 aaPredicted RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 SBK3P0C264 359 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ZNF23P17027 643 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 KPNA1P52294 538 aaPredicted RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ESRRGP62508 458 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 FKBP1AP62942 108 aaKnown RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CSHL1Q14406 222 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 TARBP2Q15633 366 aaKnown RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ZIK1Q3SY52 487 aaPredicted RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 GRTP1Q5TC63 336 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 IER5Q5VY09 327 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 HMBOX1Q6NT76 420 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ZFP1Q6P2D0 407 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CNSTQ6PJW8 725 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 LCLAT1Q6UWP7 414 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 OTOP3Q7RTS5 596 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 PIGZQ86VD9 579 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 ERI1Q8IV48 349 aaKnown RBP9.7□□□□□ -0.86
SMC1B-202ENST00000404354 CEP97Q8IW35 865 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 LSMEM2Q8N112 164 aa9.7□□□□□ -0.86
SMC1B-202ENST00000404354 RYBPQ8N488 228 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms