RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZBED4O75132 1171 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 PTP4A3O75365 173 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 GJB3O75712 270 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 NEURL1O76050 574 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 DDX58O95786 925 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 MLYCDO95822 493 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 NUDT3O95989 172 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 SERPINC1P01008 464 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 CHMP24386 653 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 CHRNA5P30532 468 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 SKIV2L2P42285 1042 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 GDF5P43026 501 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 ARSFP54793 590 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 DRG2P55039 364 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 DPTQ07507 201 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 TMEM115Q12893 351 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 RPE65Q16518 533 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 EDRF1Q3B7T1 1238 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 SYTL3Q4VX76 610 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 NAA35Q5VZE5 725 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 TBC1D9BQ66K14 1250 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 TTLL5Q6EMB2 1281 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 HMBOX1Q6NT76 420 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 AADACL2Q6P093 401 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 MIS18BP1Q6P0N0 1132 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 C16orf54Q6UWD8 224 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 CYB5R4Q7L1T6 521 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 GPAT4Q86UL3 456 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 FAM160B2Q86V87 743 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 NGEFQ8N5V2 710 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 AMER2Q8N7J2 671 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 FAM47BQ8NA70 645 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 SLC16A11Q8NCK7 471 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 RASSF8Q8NHQ8 419 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 FAR1Q8WVX9 515 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 DPF1Q92782 380 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 ATOH1Q92858 354 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 CHFRQ96EP1 664 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 FTOQ9C0B1 505 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 RANBP17Q9H2T7 1088 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 ADARB2Q9NS39 739 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 ATP8A2Q9NTI2 1148 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 SEPT11Q9NVA2 429 aaKnown RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 BABAM1Q9NWV8 329 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 TBC1D14Q9P2M4 693 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 TBC1D29Q9UFV1 150 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 MAFFQ9ULX9 164 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 CAPN7Q9Y6W3 813 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 ARHGEF17Q96PE2 2063 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 WDR17Q8IZU2 1322 aa4.16□□□□□ -1.74
HMGB1P17-201ENST00000403495 C17orf113A0A1B0GUU1 675 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 A0A1W2PPC1 479 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 A0A1W2PQM1 296 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 LINC01548A6NM66 108 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 AP3D1O14617 1153 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ADAM10O14672 748 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 AHCYL1O43865 530 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 TIPRLO75663 272 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM63AO94886 807 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 SGPL1O95470 568 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 HSPA1AP0DMV8 641 aaKnown RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 HSPA1BP0DMV9 641 aaKnown RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 CYP19A1P11511 503 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 TFEBP19484 476 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 BMP5P22003 454 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 FMO4P31512 558 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 STAT1P42224 750 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 CEBPZQ03701 1054 aaKnown RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 PMPCAQ10713 525 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 MEA1Q16626 185 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 EARS2Q5JPH6 523 aaKnown RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ENTPD8Q5MY95 495 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 INO80CQ6PI98 192 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 LRIG3Q6UXM1 1119 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZNF813Q6ZN06 617 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 FASTKD5Q7L8L6 764 aaKnown RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 TADA2BQ86TJ2 420 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 WDR5BQ86VZ2 330 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 TDRPQ86YL5 185 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 LURAP1LQ8IV03 231 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 CNGA4Q8IV77 575 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 LRRC57Q8N9N7 239 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 CADM4Q8NFZ8 388 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ETNPPLQ8TBG4 499 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 CREB3L4Q8TEY5 395 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 WDFY2Q96P53 400 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 GHITMQ9H3K2 345 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 RIOX1Q9H6W3 641 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ERVK-5Q9HDB9 667 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 PPP1R14DQ9NXH3 145 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 CORO1CQ9ULV4 474 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 GPR34Q9UPC5 381 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 LAMP3Q9UQV4 416 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC45A1Q9Y2W3 748 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ADGRF5Q8IZF2 1346 aa4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 COL11A2P13942 1736 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P17-201ENST00000403495 ANKRD18BA2A2Z9 1011 aa4.14□□□□□ -1.75
HMGB1P17-201ENST00000403495 DPPA5A6NC42 116 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms