RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 MGME1Q9BQP7 344 aa6.98□□□□□ -1.29
USP16-203ENST00000399975 ATP13A1Q9HD20 1204 aa6.98□□□□□ -1.29
USP16-203ENST00000399975 UBA2Q9UBT2 640 aaPredicted RBP6.98□□□□□ -1.29
USP16-203ENST00000399975 J3KR12 359 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 NPC1O15118 1278 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 TP73O15350 636 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 PPFIA2O75334 1257 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 SEC31AO94979 1220 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 CHRM1P11229 460 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 CR2P20023 1033 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 CD68P34810 354 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 TNFRSF4P43489 277 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 RPL21P46778 160 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 KCNJ11Q14654 390 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 MORF4L2Q15014 288 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 AAK1Q2M2I8 961 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 BEND6Q5SZJ8 279 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 RNASEH2BQ5TBB1 312 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 GRAMD4Q6IC98 578 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 RETSATQ6NUM9 610 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 EP400NLQ6ZTU2 488 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 ADHFE1Q8IWW8 467 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 BBS5Q8N3I7 341 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 SLC44A3Q8N4M1 653 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 GLIS1Q8NBF1 620 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 MAFAQ8NHW3 353 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 CHFRQ96EP1 664 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 PSKH2Q96QS6 385 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 GORASP1Q9BQQ3 440 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 TRIM51Q9BSJ1 452 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 MUC3BQ9H195 1237 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 SLC25A51Q9H1U9 297 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 GLOD4Q9HC38 313 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 ZDHHC18Q9NUE0 388 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 DMGDHQ9UI17 866 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 VPS51Q9UID3 782 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 TPX2Q9ULW0 747 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 SHOC2Q9UQ13 582 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 STARD13Q9Y3M8 1113 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 ATP9BO43861 1147 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 GSRP00390 522 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 GDI1P31150 447 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 GJA4P35212 333 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 MMP13P45452 471 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 DGKGP49619 791 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 SERPINH1P50454 418 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 MARC1Q5VT66 337 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 KCTD11Q693B1 232 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 TRIM68Q6AZZ1 485 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 IL31Q6EBC2 164 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 ZDHHC24Q6UX98 284 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 CCNI2Q6ZMN8 369 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 CEP128Q6ZU80 1094 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 RALGPS2Q86X27 583 aaPredicted RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 RELL1Q8IUW5 271 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 PPIL6Q8IXY8 311 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 APCDD1Q8J025 514 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 NAT8LQ8N9F0 302 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 IMP4Q96G21 291 aaKnown RBP6.97□□□□□ -1.29
USP16-203ENST00000399975 PARD6BQ9BYG5 372 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 EBF3Q9H4W6 596 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 KCNK12Q9HB15 430 aa6.97□□□□□ -1.29
USP16-203ENST00000399975 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP16-203ENST00000399975 OTOL1A6NHN0 477 aaPredicted RBP6.96□□□□□ -1.29
USP16-203ENST00000399975 AP3B1O00203 1094 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 EIF3HO15372 352 aaKnown RBP eCLIP6.96□□□□□ -1.29
USP16-203ENST00000399975 TULP3O75386 442 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 MLNP12872 115 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 HNRNPLP14866 589 aaKnown RBP eCLIP6.96□□□□□ -1.29
USP16-203ENST00000399975 ECHS1P30084 290 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 ACTN2P35609 894 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 PFKPQ01813 784 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 ENPP2Q13822 863 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 GRM2Q14416 872 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 ARHGEF18Q6ZSZ5 1173 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 HDXQ7Z353 690 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 C12orf40Q86WS4 652 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 MRGPRX3Q96LB0 322 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 NUDCD1Q96RS6 583 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 PNKPQ96T60 521 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 RPP25Q9BUL9 199 aaKnown RBP6.96□□□□□ -1.29
USP16-203ENST00000399975 C10orf88Q9H8K7 445 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 EPB41L5Q9HCM4 733 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 MED4Q9NPJ6 270 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 VPS45Q9NRW7 570 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 RBM22Q9NW64 420 aaKnown RBP eCLIP6.96□□□□□ -1.29
USP16-203ENST00000399975 LHX3Q9UBR4 397 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 VPS28Q9UK41 221 aa6.96□□□□□ -1.29
USP16-203ENST00000399975 MYOFQ9NZM1 2061 aa6.96□□□□□ -1.3
USP16-203ENST00000399975 GOLGA6CA6NDK9 693 aa6.96□□□□□ -1.3
USP16-203ENST00000399975 GOLGA6BA6NDN3 693 aa6.96□□□□□ -1.3
USP16-203ENST00000399975 WASH3PC4AMC7 463 aa6.96□□□□□ -1.3
USP16-203ENST00000399975 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.3
USP16-203ENST00000399975 ZBTB24O43167 697 aaPredicted RBP6.96□□□□□ -1.3
USP16-203ENST00000399975 ANXA9O76027 345 aa6.96□□□□□ -1.3
USP16-203ENST00000399975 JCHAINP01591 159 aa6.96□□□□□ -1.3
USP16-203ENST00000399975 HLA-DQB2P05538 268 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms