RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 EPS8L3Q8TE67 593 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 FIG4Q92562 907 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RFKQ969G6 155 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RCN3Q96D15 328 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 HSPA12BQ96MM6 686 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PNKPQ96T60 521 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 COMMD4Q9H0A8 199 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CHPF2Q9P2E5 772 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TMPRSS11EQ9UL52 423 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 COX7A2P14406 83 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SMYD4Q8IYR2 804 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 IQCF1Q8N6M8 205 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 KAT8Q9H7Z6 458 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 HOXC10Q9NYD6 342 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 WASHC1A8K0Z3 465 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 KIF28PB7ZC32 967 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 WASH3PC4AMC7 463 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 MPZL2O60487 215 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ATP6V1G1O75348 118 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RP2O75695 350 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PGRP06401 933 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SCP2P22307 547 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 HARS2P49590 506 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 VEGFCP49767 419 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP20A1Q6UW02 462 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 WASH2PQ6VEQ5 465 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 LIX1Q8N485 282 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SH2D3CQ8N5H7 860 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 EIF1ADQ8N9N8 165 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RAD9AQ99638 391 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 NDST4Q9H3R1 872 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 GFOD1Q9NXC2 390 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 C14orf166Q9Y224 244 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PRAMEF33A0A0G2JMD5 474 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SOWAHDA6NJG2 315 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 FOXN3O00409 490 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 BHLHE40O14503 412 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 PRAMEF10O60809 474 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SERPINB7O75635 380 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TGM2P21980 687 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SRSF11Q05519 484 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ARSHQ5FYA8 562 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 C6orf183Q5T699 404 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 XRRA1Q6P2D8 792 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TRPM4Q8TD43 1214 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CD300LFQ8TDQ1 290 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TSEN15Q8WW01 171 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 NEU2Q9Y3R4 380 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ABCC8Q09428 1581 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TFECO14948 347 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 HSPA12AO43301 675 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF207O43670 478 aaKnown RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 TCEAL4Q96EI5 215 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 MYNNQ9NPC7 610 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 NKIRAS2Q9NYR9 191 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CRTAMO95727 393 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 DNAJC14Q6Y2X3 702 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 OSBP2Q969R2 916 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 SMARCD1Q96GM5 515 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 OSBPL3Q9H4L5 887 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 RXFP1Q9HBX9 757 aa8.69□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP4B1P13584 511 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CATSPER4Q7RTX7 472 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CCDC28AQ8IWP9 274 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 IDI2Q9BXS1 227 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ADGRE3Q9BY15 652 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 FGFR4P22455 802 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NPTX2P47972 431 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NKX6-1P78426 367 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NME7Q9Y5B8 376 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ABLIM1O14639 778 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ACADVLP49748 655 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 DNAJB7Q7Z6W7 309 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PPP4R1LQ9P1A2 415 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 E2F3O00716 465 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 IRS4O14654 1257 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP11B1P15538 503 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ATXN7L2Q5T6C5 722 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 TBCKQ8TEA7 893 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 RFFLQ8WZ73 363 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP4F12Q9HCS2 524 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SPTLC3Q9NUV7 552 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 H0YIN7 160 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ITGA10O75578 1167 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 GTF2F2P13984 249 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 VAMP7P51809 220 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 CRADDP78560 199 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC13A2Q13183 592 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC39A6Q13433 755 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 RFTN2Q52LD8 501 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ATF7IP2Q5U623 682 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 SSX6Q7RTT6 188 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 DAGLBQ8NCG7 672 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 PLEKHO2Q8TD55 490 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
CACNA1C-220ENST00000399655 ATL1Q8WXF7 558 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms