RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 KCNT2Q6UVM3 1135 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ST13P4Q8IZP2 240 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 ICA1LQ8NDH6 482 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SPATA4Q8NEY3 305 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 DBF4BQ8NFT6 615 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 DTX3LQ8TDB6 740 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 AVENQ9NQS1 362 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 PAPOLBQ9NRJ5 636 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 SIGLEC16A6NMB1 481 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 C16orf96A6NNT2 1141 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 WASP42768 502 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 C11orf74Q86VG3 221 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 ARHGEF19Q8IW93 802 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 NKAPQ8N5F7 415 aaKnown RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 TMEM161BQ8NDZ6 487 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 VPS33AQ96AX1 596 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 LENG1Q96BZ8 264 aaPredicted RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 MS4A14Q96JA4 679 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 ATP6V1G3Q96LB4 118 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 DPY30Q9C005 99 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 SH3BP4Q9P0V3 963 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 KLHL20Q9Y2M5 609 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 MAFBQ9Y5Q3 323 aaPredicted RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 CMPK1P30085 196 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 GJA9P57773 515 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 CHI3L2Q15782 390 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 RABEPKQ7Z6M1 372 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 COMMD2Q86X83 199 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 FBXO36Q8NEA4 188 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 SNX27Q96L92 541 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 CDCA3Q99618 268 aaPredicted RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 APOL2Q9BQE5 337 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 NKX2-4Q9H2Z4 354 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 ZBTB17Q13105 803 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PCID2Q5JVF3 399 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 RASGRP3Q8IV61 690 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 TM6SF2Q9BZW4 377 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 IL22Q9GZX6 179 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 HPS4Q9NQG7 708 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 WARS2Q9UGM6 360 aaKnown RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 CES2O00748 559 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 GRK2P25098 689 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 IGFALSP35858 605 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 ABL2P42684 1182 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 ZNF143P52747 638 aaPredicted RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 ZSCAN26Q16670 478 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PUS10Q3MIT2 529 aaKnown RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 TMC5Q6UXY8 1006 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PDZD7Q9H5P4 517 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 DNAJC11Q9NVH1 559 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 SOWAHBA6NEL2 793 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 GTPBP1O00178 669 aaKnown RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 CCNB1P14635 433 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 DPP6P42658 865 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 CAPRIN2Q6IMN6 1127 aaKnown RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 BADQ92934 168 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 KCNK16Q96T55 309 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PCDH9Q9HC56 1237 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PRKAG3Q9UGI9 489 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 SCOCQ9UIL1 159 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 MORC2Q9Y6X9 1032 aaPredicted RBP8.05□□□□□ -1.12
USP47-203ENST00000399455 BTN3A1O00481 513 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 CLCNKBP51801 687 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PLEKHM3Q6ZWE6 761 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 PIGZQ86VD9 579 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 SLC2A4RGQ9NR83 387 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 RBPJLQ9UBG7 517 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 BLOC1S6Q9UL45 172 aa8.05□□□□□ -1.12
USP47-203ENST00000399455 POP4O95707 220 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 CASP6P55212 293 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 RFX8Q6ZV50 586 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SRLQ86TD4 932 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SAPCD2Q86UD0 394 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 DNAAF5Q86Y56 855 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SIX5Q8N196 739 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 EFCAB3Q8N7B9 438 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 HAPLN3Q96S86 360 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 MRPL45Q9BRJ2 306 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 ERP44Q9BS26 406 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 MANSC1Q9H8J5 431 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 NCKIPSDQ9NZQ3 722 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TOPAZ1Q8N9V7 1692 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 SMIM28A0A1B0GU29 152 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 TRIM49D1C9J1S8 452 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 FGF18O76093 207 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ATP4AP20648 1035 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 HNRNPH1P31943 449 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 TIE1P35590 1138 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 RBFAQ8N0V3 343 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 HEPHQ9BQS7 1158 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 ALG13Q9NP73 1137 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 IMP3Q9NV31 184 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 VAV3Q9UKW4 847 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 RGPD8O14715 1765 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 FAM220BPB1ANY3 271 aa8.04□□□□□ -1.12
USP47-203ENST00000399455 LPOP22079 712 aaPredicted RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 WARSP23381 471 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 MRPS25P82663 173 aaKnown RBP8.04□□□□□ -1.12
USP47-203ENST00000399455 BIKQ13323 160 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms