RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SLC22A2O15244 555 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 EPHX2P34913 555 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 TRIM25Q14258 630 aaKnown RBP14.2□□□□□ -0.14
APOB-202ENST00000399256 RFTN1Q14699 578 aaPredicted RBP14.2□□□□□ -0.14
APOB-202ENST00000399256 GRM3Q14832 879 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 TMEM132DQ14C87 1099 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 DGKDQ16760 1214 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 Q3C1V9 767 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 CNTD1Q8N815 330 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 SNX31Q8N9S9 440 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 FAM47BQ8NA70 645 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 TRPM4Q8TD43 1214 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 KCTD4Q8WVF5 259 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 SLCO4A1Q96BD0 722 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 PPWD1Q96BP3 646 aaKnown RBP14.2□□□□□ -0.14
APOB-202ENST00000399256 PPP1R14BQ96C90 147 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 OSBPL6Q9BZF3 934 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 PRDM12Q9H4Q4 367 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 PDZD7Q9H5P4 517 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 HACL1Q9UJ83 578 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 TNFSF13BQ9Y275 285 aa14.2□□□□□ -0.14
APOB-202ENST00000399256 SH3PXD2BA1X283 911 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 HCRTO43612 131 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 VARSP26640 1264 aaKnown RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 OAZ1P54368 228 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 TNFAIP1Q13829 316 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 SLC10A6Q3KNW5 377 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 PKDCCQ504Y2 493 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 CERCAMQ5T4B2 595 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 HMBOX1Q6NT76 420 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 KCNMB4Q86W47 210 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 SPATA6LQ8N4H0 392 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 SLC35F5Q8WV83 523 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 SEPT1Q8WYJ6 367 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 LPGAT1Q92604 370 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 KLHL8Q9P2G9 620 aaPredicted RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 TLK1Q9UKI8 766 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 RUVBL2Q9Y230 463 aaKnown RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 PCDHGA4Q9Y5G9 962 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 PARP14Q460N5 1801 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 HTRA2O43464 458 aaPredicted RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 PTPN9P43378 593 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 NAA20P61599 178 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 ELMSAN1Q6PJG2 1045 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 Q6ZNX1 250 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 TMEM151AQ8N4L1 468 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 FAM110BQ8TC76 370 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 IL22Q9GZX6 179 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 VRTNQ9H8Y1 702 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 PICK1Q9NRD5 415 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 TIPRLO75663 272 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 C8BP07358 591 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 TPH1P17752 444 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 CTBSQ01459 385 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 ZNF460Q14592 562 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 LAYNQ6UX15 382 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 GPR141Q7Z602 305 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 LRRC43Q8N309 656 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 ZBTB8BQ8NAP8 495 aaPredicted RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 SLC7A14Q8TBB6 771 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 GIPC3Q8TF64 312 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 ISOC1Q96CN7 298 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 TSNARE1Q96NA8 513 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 OMDQ99983 421 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 C11orf84Q9BUA3 381 aaPredicted RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 CLK4Q9HAZ1 481 aaKnown RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 DPP3Q9NY33 737 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 VTI1BQ9UEU0 232 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 KIAA1257Q9ULG3 409 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 CNOT6Q9ULM6 557 aaKnown RBP14.19□□□□□ -0.14
APOB-202ENST00000399256 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 NME7Q9Y5B8 376 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
APOB-202ENST00000399256 DDNO94850 711 aaPredicted RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 ADORA2BP29275 332 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 NUP107P57740 925 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 RHDQ02161 417 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 SLC44A4Q53GD3 710 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 CROCCP3Q8IVE0 287 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 LZTR1Q8N653 840 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 NDRG1Q92597 394 aaKnown RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 C12orf43Q96C57 262 aaKnown RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 TRPC7Q9HCX4 862 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 CHRAC1Q9NRG0 131 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 BFARQ9NZS9 450 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 SUCOQ9UBS9 1254 aaKnown RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 MID2Q9UJV3 735 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 CDC14AQ9UNH5 594 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 LCTP09848 1927 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 TIMM44O43615 452 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 ADSLP30566 484 aaPredicted RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 PSMD7P51665 324 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 CCR3P51677 355 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 SLC5A3P53794 718 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 AMHR2Q16671 573 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 EFCAB12Q6NXP0 572 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 DHRS4L2Q6PKH6 230 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 MAMDC4Q6UXC1 1216 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 ZBTB49Q6ZSB9 765 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms