RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SYCP2LQ5T4T6 812 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PEAR1Q5VY43 1037 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PSTKQ8IV42 348 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PIP4K2CQ8TBX8 421 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 GRIN3AQ8TCU5 1115 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SNX19Q92543 992 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 EIF3CQ99613 913 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NCAPGQ9BPX3 1015 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TM6SF2Q9BZW4 377 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 MIR1-1HGQ9H1L0 117 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SGK2Q9HBY8 427 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 UVRAGQ9P2Y5 699 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 EIF2B4Q9UI10 523 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SLCO1B1Q9Y6L6 691 aa14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NYNRINQ9P2P1 1898 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PRR5-ARHGAP8B1AHC4 643 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 BUB1O43683 1085 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CFIP05156 583 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CHRNA3P32297 505 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 YBEYP58557 167 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ARHGAP8P85298 464 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SERINC3Q13530 473 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DPYSL2Q16555 572 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 WDR45BQ5MNZ6 344 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NCEH1Q6PIU2 408 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DSG4Q86SJ6 1040 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NPWQ8N729 165 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SLC35G2Q8TBE7 412 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DNASE2BQ8WZ79 361 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SLC39A8Q9C0K1 460 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 LRRC19Q9H756 370 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 FZD4Q9ULV1 537 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 MFHAS1Q9Y4C4 1052 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TMEM110-MUSTN1A8MSY1 372 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 KPNA3O00505 521 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ALOX15BO15296 676 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 FOXD2O60548 495 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PROSCO94903 275 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 FSBPO95073 299 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 GKP32189 559 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 GJC1P36383 396 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 RECQLP46063 649 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ID4P47928 161 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CNTN1Q12860 1018 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DPYSQ14117 519 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PARP15Q460N3 678 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ARSIQ5FYB1 569 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 FAM46CQ5VWP2 391 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SLC23A3Q6PIS1 610 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 POLNQ7Z5Q5 900 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TP53INP2Q8IXH6 220 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ZCCHC9Q8N567 271 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PCDH20Q8N6Y1 951 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 OR6K2Q8NGY2 324 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 OR14C36Q8NHC7 312 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CCDC114Q96M63 670 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 EDEM2Q9BV94 578 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CEP44Q9C0F1 390 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ETNK2Q9NVF9 386 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 EVLQ9UI08 416 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CDV3Q9UKY7 258 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 WASF2Q9Y6W5 498 aa14.36□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PI4KAP42356 2102 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 C1QTNF3-AMACRE9PGA6 284 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 J3KR12 359 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 LEFTY1O75610 366 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 IGHV4-34P06331 123 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CD48P09326 243 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 AMPD1P23109 780 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 HOXD12P35452 270 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ARL4AP40617 200 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 HCAR3P49019 387 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CCNHP51946 323 aaPredicted RBP14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ADPRHP54922 357 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 GEMIN4P57678 1058 aaKnown RBP14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TAS2R40P59535 323 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 SFSWAPQ12872 951 aaKnown RBP14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 MESDQ14696 234 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DUOXA1Q1HG43 343 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CARD16Q5EG05 197 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ATXN7L2Q5T6C5 722 aaPredicted RBP14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 ARHGAP12Q8IWW6 846 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TMIEQ8NEW7 156 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NETO1Q8TDF5 533 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TEKT4Q8WW24 435 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CSPG4P5Q96PW8 444 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 NUSAP1Q9BXS6 441 aaKnown RBP14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CAPN10Q9HC96 672 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 PCDH18Q9HCL0 1135 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 DLL3Q9NYJ7 618 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 IL36AQ9UHA7 158 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 TFR2Q9UP52 801 aa14.35□□□□□ -0.11
HLA-DQB1-202ENST00000399079 CXorf51AA0A1B0GTR3 108 aa14.34□□□□□ -0.11
HLA-DQB1-202ENST00000399079 H3BRJ5 948 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms