RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZSCAN5CA6NGD5 496 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM86B1E9PN63 330 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 BTN3A1O00481 513 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 INPP4BO15327 924 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM86B2P0C5J1 330 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 FGFR1P11362 822 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 COX7A2P14406 83 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF24P17028 368 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TGFBR2P37173 567 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 BNC1Q01954 994 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 STX4Q12846 297 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SEZ6Q53EL9 994 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 KLHL12Q53G59 568 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TTMPQ5BVD1 217 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 GALNT18Q6P9A2 607 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM220AQ7Z4H9 259 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SPPL2AQ8TCT8 520 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 KAZALD1Q96I82 304 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 RTKNQ9BST9 563 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ABHD16BQ9H3Z7 469 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 STARD7Q9NQZ5 370 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 PNPLA3Q9NST1 481 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TRPC4Q9UBN4 977 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 C2CD2Q9Y426 696 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 RGSL1A5PLK6 1076 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 IL6P05231 212 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 NR1H2P55055 460 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 PPIDQ08752 370 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TYW3Q6IPR3 259 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 EIF3MQ7L2H7 374 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 NECAB2Q7Z6G3 386 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ADGRA1Q86SQ6 560 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 EMC1Q8N766 993 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 PIWIL2Q8TC59 973 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF483Q8TF39 744 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 CD101Q93033 1021 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 RIBC2Q9H4K1 309 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SSU72Q9NP77 194 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SNX8Q9Y5X2 465 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 BCL9O00512 1426 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 NRCAMQ92823 1304 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 RPA3P35244 121 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 DCTN2Q13561 401 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 CRY1Q16526 586 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 CELF3Q5SZQ8 465 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF618Q5T7W0 954 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 MFSD4BQ5TF39 518 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 LIPMQ5VYY2 423 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 LGI2Q8N0V4 545 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 CERKQ8TCT0 537 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SETD4Q9NVD3 440 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 DNAJC28Q9NX36 388 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 AHCYL1O43865 530 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 DNAJA2O60884 412 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 MAFO75444 373 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 PSMD10O75832 226 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 IDO1P14902 403 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 VAV1P15498 845 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 AMPD1P23109 780 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 POU1F1P28069 291 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 ERFP50548 548 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 RAB10P61026 200 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TCHHL1Q5QJ38 904 aaPredicted RBP8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 HLA-DQA1Q5Y7H0 255 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 TOP6BLQ8N6T0 577 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 SLC38A2Q96QD8 506 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 CDRT15Q96T59 188 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 YME1L1Q96TA2 773 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 EFR3BQ9Y2G0 817 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 UBIAD1Q9Y5Z9 338 aa8.47□□□□□ -1.05
SPTLC3-201ENST00000399002 URADA6NGE7 173 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 SNX3O60493 162 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 CLK3P49761 638 aaKnown RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 IL27RAQ6UWB1 636 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 SLC30A10Q6XR72 485 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 TSHZ1Q6ZSZ6 1077 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 DHDDSQ86SQ9 333 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 ILDR1Q86SU0 546 aaPredicted RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 UTP15Q8TED0 518 aaKnown RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 CENPIQ92674 756 aaPredicted RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 CERS2Q96G23 380 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 RNF145Q96MT1 663 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 APBA2Q99767 749 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 TKTL2Q9H0I9 626 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 CNGB3Q9NQW8 809 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 COL6A2P12110 1019 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 POLR2EP19388 210 aaKnown RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 TLX1P31314 330 aaPredicted RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 EPHX2P34913 555 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 ACOX1Q15067 660 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 MIIPQ5JXC2 388 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 CLVS1Q8IUQ0 354 aaPredicted RBP8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 CLYBLQ8N0X4 340 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 RASGEF1CQ8N431 466 aa8.46□□□□□ -1.05
SPTLC3-201ENST00000399002 PDPRQ8NCN5 879 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms