RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 IL2P60568 153 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 CDC42P60953 191 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 PDK4Q16654 411 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 GPR107Q5VW38 600 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 HIPK1Q86Z02 1210 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 ZNF540Q8NDQ6 660 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 CLN6Q9NWW5 311 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 RSL24D1Q9UHA3 163 aaKnown RBP11.94□□□□□ -0.5
TMF1-201ENST00000398559 IKZF3Q9UKT9 509 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 TISP43B9A030 160 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 PEX11AO75192 247 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 NAGLUP54802 743 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 NR1H2P55055 460 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 TRIM32Q13049 653 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 PANX3Q96QZ0 392 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 PLGRKTQ9HBL7 147 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 ACTL7BQ9Y614 415 aa11.94□□□□□ -0.5
TMF1-201ENST00000398559 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 H3BMM5 538 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 HOXA2O43364 376 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 CYP1A2P05177 515 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 PIK3CGP48736 1102 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 USP46P62068 366 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 PCID2Q5JVF3 399 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ART4Q93070 314 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 TRIM39Q9HCM9 518 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ZMYM2Q9UBW7 1377 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 STX11O75558 287 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 OR6A2O95222 327 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 NUDT14O95848 222 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 DNAJB2P25686 324 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 SFSWAPQ12872 951 aaKnown RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 RETSATQ6NUM9 610 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 BRSK2Q8IWQ3 736 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 PARP8Q8N3A8 854 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 RNASE11Q8TAA1 199 aaKnown RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 VAT1Q99536 393 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ZNF222Q9UK12 451 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ALDH2P05091 517 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ENO2P09104 434 aaPredicted RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 MYBL2P10244 700 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 DPEP1P16444 411 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 UNC5AQ6ZN44 842 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 DNERQ8NFT8 737 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 PTCD3Q96EY7 689 aaKnown RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 COMMD3-BMI1R4GMX3 469 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 BTN3A3O00478 584 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 IDH3BO43837 385 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ETS2P15036 469 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 NFKB1P19838 968 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 MAPK9P45984 424 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 TTC23Q5W5X9 447 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 FAM20CQ8IXL6 584 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 OFCC1Q8IZS5 231 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 SELENOMQ8WWX9 145 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 LENG1Q96BZ8 264 aaPredicted RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 CEMIPQ8WUJ3 1361 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 A0A0A0MRY4 1105 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 H3BRB1 525 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 EML1O00423 815 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 HUNKP57058 714 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ACSM2AQ08AH3 577 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 ACSM2BQ68CK6 577 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 NEPROQ6NW34 567 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 GCNT7Q6ZNI0 430 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 KAT5Q92993 513 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 CERS2Q96G23 380 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 SPATA13Q96N96 652 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 TUT1Q9H6E5 874 aaKnown RBP11.93□□□□□ -0.5
TMF1-201ENST00000398559 SPATA31A1Q5TZJ5 1347 aa11.93□□□□□ -0.5
TMF1-201ENST00000398559 IGSF6O95976 241 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 ZNF549Q6P9A3 640 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
TMF1-201ENST00000398559 ARHGAP36Q6ZRI8 547 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 RD3Q7Z3Z2 195 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 KCNK18Q7Z418 384 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 ZC3H7AQ8IWR0 971 aaKnown RBP11.92□□□□□ -0.5
TMF1-201ENST00000398559 PTGR2Q8N8N7 351 aaPredicted RBP11.92□□□□□ -0.5
TMF1-201ENST00000398559 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
TMF1-201ENST00000398559 MKL2Q9ULH7 1088 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 NTRK1P04629 796 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 ACADMP11310 421 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 TSPAN8P19075 237 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 DGKAP23743 735 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 RPL5P46777 297 aaKnown RBP11.92□□□□□ -0.5
TMF1-201ENST00000398559 BST1Q10588 318 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 SPESP1Q6UW49 350 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 PROSER1Q86XN7 944 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 FBXL16Q8N461 479 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 AMER2Q8N7J2 671 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 STAG3L4Q8TBR4 150 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 EPS8L1Q8TE68 723 aa11.92□□□□□ -0.5
TMF1-201ENST00000398559 TRAPPC12Q8WVT3 735 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms