RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TM6SF2Q9BZW4 377 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 LZTFL1Q9NQ48 299 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 ITM2CQ9NQX7 267 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 USP36Q9P275 1121 aaKnown RBP16.07■□□□□ 0.16
MBD1-207ENST00000398488 LHX3Q9UBR4 397 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 IPO11Q9UI26 975 aaKnown RBP16.07■□□□□ 0.16
MBD1-207ENST00000398488 PCDHA3Q9Y5H8 950 aa16.07■□□□□ 0.16
MBD1-207ENST00000398488 ARHGAP42A6NI28 874 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 MID1O15344 667 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 CTNNA1P35221 906 aaKnown RBP16.06■□□□□ 0.16
MBD1-207ENST00000398488 RGRP47804 291 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 PSMD8P48556 350 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 TPMTP51580 245 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 CLCN6P51797 869 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 POM121L1PQ3SYA9 428 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 SPOCD1Q6ZMY3 1216 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 MAP7D3Q8IWC1 876 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 KATNAL2Q8IYT4 538 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 AADATQ8N5Z0 425 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 LZTR1Q8N653 840 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 DEFB119Q8N690 84 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 ZNF419Q96HQ0 510 aaPredicted RBP16.06■□□□□ 0.16
MBD1-207ENST00000398488 NSMCE3Q96MG7 304 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 IRF2BPLQ9H1B7 796 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 DUSP15Q9H1R2 295 aaPredicted RBP16.06■□□□□ 0.16
MBD1-207ENST00000398488 EPC1Q9H2F5 836 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 DDX56Q9NY93 547 aaKnown RBP16.06■□□□□ 0.16
MBD1-207ENST00000398488 PPM1HQ9ULR3 514 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 HPCAL4Q9UM19 191 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 PPP2R2CQ9Y2T4 447 aa16.06■□□□□ 0.16
MBD1-207ENST00000398488 MCF2LO15068 1137 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 MUSKO15146 869 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 INSIG1O15503 277 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 MAFKO60675 156 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 GJB3O75712 270 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 CCDC175P0C221 793 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 CTNNA2P26232 953 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 SLC8A1P32418 973 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 DNA2P51530 1060 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 SIM2Q14190 667 aaPredicted RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 ELAVL3Q14576 367 aaKnown RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 NUMA1Q14980 2115 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 CST6Q15828 149 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 USP39Q53GS9 565 aaKnown RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 ZNF776Q68DI1 518 aaPredicted RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 SLC9A4Q6AI14 798 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 B4GALNT4Q76KP1 1039 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 ASCL5Q7RTU5 278 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 FAM124AQ86V42 546 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 EXOC2Q96KP1 924 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 CEP44Q9C0F1 390 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 DTLQ9NZJ0 730 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 SAE1Q9UBE0 346 aaPredicted RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
MBD1-207ENST00000398488 WASF2Q9Y6W5 498 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 SDK1Q7Z5N4 2213 aa16.05■□□□□ 0.16
MBD1-207ENST00000398488 PROB1E7EW31 1015 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 IL1BP01584 269 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 CHRNA3P32297 505 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 DYNLT1P63172 113 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 IL10RBQ08334 325 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 SLC10A7Q0GE19 358 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 GALNT2Q10471 571 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PLK5Q496M5 336 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 CARD16Q5EG05 197 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 ARSIQ5FYB1 569 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PRR23BQ6ZRT6 265 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 ZNF662Q6ZS27 426 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 RFX6Q8HWS3 928 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PCDH20Q8N6Y1 951 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 PABPC3Q9H361 631 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 DONSONQ9NYP3 566 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 FRYLO94915 3013 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 hCG_1818297A0A087WSY0 165 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 CXorf51AA0A1B0GTR3 108 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 A0A1W2PP55 124 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 ZNF487B1APH4 448 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 IGLV3-19P01714 112 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PTMAP06454 111 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 ACSL1P33121 698 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 CNR2P34972 360 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 DRD3P35462 400 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 DCAF12L1Q5VU92 463 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 KAZNQ674X7 775 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 ZC3H14Q6PJT7 736 aaKnown RBP16.04■□□□□ 0.16
MBD1-207ENST00000398488 CEP68Q76N32 757 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PEX26Q7Z412 305 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 VSIG1Q86XK7 387 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 TMEFF1Q8IYR6 380 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 PGBD5Q8N414 524 aa16.04■□□□□ 0.16
MBD1-207ENST00000398488 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms