RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 FATE1Q969F0 183 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 RTP4Q96DX8 246 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 LRRC3BQ96PB8 259 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 FAM83CQ9BQN1 747 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 FEM1AQ9BSK4 669 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 CINPQ9BW66 212 aaPredicted RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 NOL6Q9H6R4 1146 aaKnown RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 ABCB8Q9NUT2 735 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 RBM22Q9NW64 420 aaKnown RBP eCLIP14.49□□□□□ -0.09
SKA1-202ENST00000398452 IGSF9Q9P2J2 1179 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 DEC1Q9P2X7 70 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 MTRF1LQ9UGC7 380 aaKnown RBP14.49□□□□□ -0.09
SKA1-202ENST00000398452 RSPH14Q9UHP6 348 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 GGA2Q9UJY4 613 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 SLC8A2Q9UPR5 921 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 SNX24Q9Y343 169 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 C5orf42Q9H799 3197 aa14.49□□□□□ -0.09
SKA1-202ENST00000398452 C2CD4DB7Z1M9 353 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 SMAPO00193 183 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 CTIFO43310 598 aaKnown RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 CACNG3O60359 315 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 PRAMEF11O60813 436 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 VAV1P15498 845 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 POLR2EP19388 210 aaKnown RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 ITIH2P19823 946 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 MMP13P45452 471 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 GDF10P55107 478 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 IFI35P80217 286 aaPredicted RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 SARNPP82979 210 aaKnown RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 HTR4Q13639 388 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 LBRQ14739 615 aaKnown RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 E2F5Q15329 346 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 PLEKHG6Q3KR16 790 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 MAP9Q49MG5 647 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 ARHGAP36Q6ZRI8 547 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 CCDC110Q8TBZ0 833 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 CASKIN2Q8WXE0 1202 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 AGAP3Q96P47 875 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 ACE2Q9BYF1 805 aaPredicted RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 FAM129AQ9BZQ8 928 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 USP29Q9HBJ7 922 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 RAB6BQ9NRW1 208 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 WHRNQ9P202 907 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 SEPT3Q9UH03 358 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 DMGDHQ9UI17 866 aaKnown RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 TPX2Q9ULW0 747 aaKnown RBP14.48□□□□□ -0.09
SKA1-202ENST00000398452 MUC6Q6W4X9 2439 aa14.48□□□□□ -0.09
SKA1-202ENST00000398452 PRR33A8MZF0 331 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 ANHXE9PGG2 379 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 J3KR12 359 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PSMD3O43242 534 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 ATP5BP06576 529 aaKnown RBP14.47□□□□□ -0.09
SKA1-202ENST00000398452 ETS1P14921 441 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PTPN3P26045 913 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 MZF1P28698 734 aaPredicted RBP14.47□□□□□ -0.09
SKA1-202ENST00000398452 RPL22P35268 128 aaKnown RBP14.47□□□□□ -0.09
SKA1-202ENST00000398452 HSPA9P38646 679 aaKnown RBP14.47□□□□□ -0.09
SKA1-202ENST00000398452 PLK1P53350 603 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 DRG2P55039 364 aaKnown RBP14.47□□□□□ -0.09
SKA1-202ENST00000398452 SLC20A2Q08357 652 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PARP6Q2NL67 630 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 FSCBQ5H9T9 825 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PITRM1Q5JRX3 1037 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 ARTNQ5T4W7 220 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 IZUMO3Q5VZ72 239 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 DUPD1Q68J44 220 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PPP1R21Q6ZMI0 780 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PLPP6Q8IY26 295 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 ZNF567Q8N184 647 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 UCMAQ8WVF2 138 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 PLA2G2FQ9BZM2 168 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 ANAPC5Q9UJX4 755 aa14.47□□□□□ -0.09
SKA1-202ENST00000398452 ESYT3A0FGR9 886 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 DNALI1O14645 258 aaPredicted RBP14.46□□□□□ -0.09
SKA1-202ENST00000398452 TULP3O75386 442 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 ANXA9O76027 345 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 ASLP04424 464 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 ZSCAN5DPP0CG00 497 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 HLA-FP30511 346 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 CD70P32970 193 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 ST8SIA6P61647 398 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 PFKPQ01813 784 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 TNK2Q07912 1038 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 WASHC5Q12768 1159 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 RNF43Q68DV7 783 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 WDR93Q6P2C0 686 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 PPIL6Q8IXY8 311 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 TAB3Q8N5C8 712 aaPredicted RBP14.46□□□□□ -0.09
SKA1-202ENST00000398452 TTC8Q8TAM2 541 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 WFDC5Q8TCV5 224 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.46□□□□□ -0.09
SKA1-202ENST00000398452 MAML1Q92585 1016 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 ASIC4Q96FT7 647 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 TEKT5Q96M29 485 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 IL12RB2Q99665 862 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 HINFPQ9BQA5 517 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 PARD6BQ9BYG5 372 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 CEP41Q9BYV8 373 aa14.46□□□□□ -0.09
SKA1-202ENST00000398452 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms