RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GP5P40197 560 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 SLC5A3P53794 718 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 PPIL2Q13356 520 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 PDK1Q15118 436 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 CYTH1Q15438 398 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 INAQ16352 499 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 DEPDC1Q5TB30 811 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 ITPRIPL1Q6GPH6 555 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 NEPROQ6NW34 567 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 NLRP7Q8WX94 980 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 CDCA5Q96FF9 252 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 PLEKHA8Q96JA3 519 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 FCRL3Q96P31 734 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 LENG8Q96PV6 779 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 OR52B2Q96RD2 323 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 NACA2Q9H009 215 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 CDH19Q9H159 772 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 CAB39LQ9H9S4 337 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 COX16Q9P0S2 106 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 SCHIP1Q9P0W5 487 aaPredicted RBP16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 ZNF487B1APH4 448 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 NEMP1O14524 444 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 HBP1O60381 514 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 USP12O75317 370 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 CCDC130P13994 396 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 ARL4AP40617 200 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 PTPN9P43378 593 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 C21orf59P57076 290 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 TUBA4AP68366 448 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 IRF9Q00978 393 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 DLG2Q15700 870 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 INSCQ1MX18 579 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 OR6B3Q8NGW1 331 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 CERS2Q96G23 380 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 SMARCAD1Q9H4L7 1026 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 PCDHB12Q9Y5F1 795 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 K7EPI3 171 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 ZNF701M0R085 212 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 SPTLC1O15269 473 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 H6PDO95479 791 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 MSX2P35548 267 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 GARSP41250 739 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 EIF2B2P49770 351 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 NUDT2P50583 147 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 SEPT6Q14141 434 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 FSCBQ5H9T9 825 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 EPGNQ6UW88 154 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 HACE1Q8IYU2 909 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 CHPT1Q8WUD6 406 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 NDRG1Q92597 394 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 C11orf84Q9BUA3 381 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 TRNAU1APQ9NX07 287 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 GIT1Q9Y2X7 761 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 CDY2AQ9Y6F7 541 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 CDY1Q9Y6F8 540 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 SCN1AP35498 2009 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 MCM3APO60318 1980 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 POLBP06746 335 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 INSRRP14616 1297 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 PPM1LQ5SGD2 360 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 FASTKD5Q7L8L6 764 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 STRA8Q7Z7C7 330 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 TP53INP2Q8IXH6 220 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 TDRD5Q8NAT2 981 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 OR52K1Q8NGK4 314 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 EME1Q96AY2 570 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 ZNF669Q96BR6 464 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 AGAP2Q99490 1192 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 WDR55Q9H6Y2 383 aaPredicted RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 CNOT11Q9UKZ1 510 aaKnown RBP16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 CDH7Q9ULB5 785 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 USP3Q9Y6I4 520 aa16.23■□□□□ 0.19
CHMP1A-201ENST00000397901 A0A1B0GTW7 788 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 XPO1O14980 1071 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 ESRRBO95718 433 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 CAPNS1P04632 268 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 KCNC4Q03721 635 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 NAB1Q13506 487 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 GPR180Q86V85 440 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 CHERPQ8IWX8 916 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 GALNT4Q8N4A0 578 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 TTC39CQ8N584 583 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 STARD8Q92502 1023 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 CENPIQ92674 756 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 RTKNQ9BST9 563 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 PDGFCQ9NRA1 345 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 STK39Q9UEW8 545 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 BCAP29Q9UHQ4 241 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 PCNTO95613 3336 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 CNOT3O75175 753 aaKnown RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 TOMM70O94826 608 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 ZBTB11O95625 1053 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 LTFP02788 710 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 C8BP07358 591 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 CCR10P46092 362 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 NEK2P51955 445 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 ATXN3P54252 364 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 GJC2Q5T442 439 aaPredicted RBP16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 SLC26A9Q7LBE3 791 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms