RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 CDY2AQ9Y6F7 541 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 CDY1Q9Y6F8 540 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 TTC3P53804 2025 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 TTC24A2A3L6 582 aaPredicted RBP22.19■■□□□ 1.14
NFIX-203ENST00000397661 FKBP6O75344 327 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 CLCNKBP51801 687 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 GK3PQ14409 553 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 PIP4K2CQ8TBX8 421 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 LMCD1Q9NZU5 365 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 APPL1Q9UKG1 709 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 PCDHB12Q9Y5F1 795 aa22.19■■□□□ 1.14
NFIX-203ENST00000397661 WDR90Q96KV7 1748 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 CHRNA4P43681 627 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 USP46P62068 366 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 TBCCQ15814 346 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 ESRP1Q6NXG1 681 aaKnown RBP22.18■■□□□ 1.14
NFIX-203ENST00000397661 IYDQ6PHW0 289 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 MAML3Q96JK9 1138 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 TSNARE1Q96NA8 513 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 NPAS2Q99743 824 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 TINF2Q9BSI4 451 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 TRIP12Q14669 1992 aaPredicted RBP22.18■■□□□ 1.14
NFIX-203ENST00000397661 BDNFP23560 247 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 FOLH1Q04609 750 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 LAYNQ6UX15 382 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 FBXW8Q8N3Y1 598 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 TTC16Q8NEE8 873 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 NXNL1Q96CM4 212 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 HNRNPABQ99729 332 aaKnown RBP22.18■■□□□ 1.14
NFIX-203ENST00000397661 COPS7BQ9H9Q2 264 aaPredicted RBP22.18■■□□□ 1.14
NFIX-203ENST00000397661 GTSE1Q9NYZ3 720 aa22.18■■□□□ 1.14
NFIX-203ENST00000397661 AURKAO14965 403 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 MSI1O43347 362 aaKnown RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 HDCP19113 662 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 PIK3R1P27986 724 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 LSAMPQ13449 338 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 SCAMP5Q8TAC9 235 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 COLEC11Q9BWP8 271 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 WDR6Q9NNW5 1121 aaKnown RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 PTGESO14684 152 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 EPGNQ6UW88 154 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 TMC7Q7Z402 723 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 SMG8Q8ND04 991 aaKnown RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 NAT9Q9BTE0 207 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 KATNBL1Q9H079 304 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 C1orf21Q9H246 121 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 DNAJC28Q9NX36 388 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 GALNT8Q9NY28 637 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 XPR1Q9UBH6 696 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 AHSGP02765 367 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 XRCC1P18887 633 aaPredicted RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 TFEBP19484 476 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 HARS2P49590 506 aaKnown RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 CNGA3Q16281 694 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 CCDC153Q494R4 210 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 RBM44Q6ZP01 1051 aaKnown RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 LDB1Q86U70 411 aaPredicted RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 ZNF354CQ86Y25 554 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 PCDH20Q8N6Y1 951 aaKnown RBP22.17■■□□□ 1.14
NFIX-203ENST00000397661 IGSF9Q9P2J2 1179 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 SFMBT1Q9UHJ3 866 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 TLL2Q9Y6L7 1015 aa22.17■■□□□ 1.14
NFIX-203ENST00000397661 C9IYK1 514 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 THOP1P52888 689 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 GJA9P57773 515 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 FSCBQ5H9T9 825 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 UBXN11Q5T124 520 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 SEL1L3Q68CR1 1132 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 FSTL5Q8N475 847 aaPredicted RBP22.16■■□□□ 1.14
NFIX-203ENST00000397661 CNTD1Q8N815 330 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 C3orf58Q8NDZ4 430 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 CNBD2Q96M20 576 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 GPAMQ9HCL2 828 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 NRCAMQ92823 1304 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 C15orf38-AP3S2A0A0A6YYH1 394 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 GABRB3P28472 473 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 SOX11P35716 441 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 ARPINQ7Z6K5 226 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 TMEM135Q86UB9 458 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 CEP97Q8IW35 865 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 ICA1LQ8NDH6 482 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 ZMIZ2Q8NF64 920 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 ACTRT2Q8TDY3 377 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 GRIP2Q9C0E4 1043 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 TSPYL2Q9H2G4 693 aaPredicted RBP22.16■■□□□ 1.14
NFIX-203ENST00000397661 MIOSQ9NXC5 875 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 COMMD3-BMI1R4GMX3 469 aa22.16■■□□□ 1.14
NFIX-203ENST00000397661 TRPA1O75762 1119 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 CYP2B6P20813 491 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 DAOAP59103 153 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 PAFAH1B3Q15102 231 aaKnown RBP22.15■■□□□ 1.14
NFIX-203ENST00000397661 PDZD4Q76G19 769 aaPredicted RBP22.15■■□□□ 1.14
NFIX-203ENST00000397661 EXT2Q93063 718 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 FICDQ9BVA6 458 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 NDFIP2Q9NV92 336 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 CPA4Q9UI42 421 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 CXCR3P49682 368 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 ITKQ08881 620 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 FAM35AQ86V20 835 aa22.15■■□□□ 1.14
NFIX-203ENST00000397661 DSELQ8IZU8 1212 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms