RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
CNTN4-201ENST00000397459 ZCWPW2A0A1B0GU75 182 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 TNPO2O14787 897 aaKnown RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 ZBTB14O43829 449 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 CACNG3O60359 315 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 CELF2O95319 508 aaKnown RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 CRTAMO95727 393 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 TFEBP19484 476 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 SLC26A3P40879 764 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 TAF6P49848 677 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 FKBP1BP68106 108 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 GALNT2Q10471 571 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 PCID2Q5JVF3 399 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 C9orf57Q5W0N0 161 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 RNF111Q6ZNA4 994 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 SLC22A9Q8IVM8 553 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 SCML4Q8N228 414 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 LZTR1Q8N653 840 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 CCDC185Q8N715 623 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 APPL2Q8NEU8 664 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 CALML6Q8TD86 181 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 KBTBD7Q8WVZ9 684 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 C18orf25Q96B23 403 aaPredicted RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 BIRC8Q96P09 236 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 AGAP3Q96P47 875 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 UHRF1Q96T88 793 aaPredicted RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 MRPL57Q9BQC6 102 aaKnown RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 UNC93B1Q9H1C4 597 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 UPF3AQ9H1J1 476 aaKnown RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 MRPL46Q9H2W6 279 aaKnown RBP8.27□□□□□ -1.09
CNTN4-201ENST00000397459 PDGFCQ9NRA1 345 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 LZTS1Q9Y250 596 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 SLC45A1Q9Y2W3 748 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 ACOT9Q9Y305 439 aa8.27□□□□□ -1.09
CNTN4-201ENST00000397459 E9PBE3 544 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 PIRO00625 290 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 MAP3K13O43283 966 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 KLHL41O60662 606 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 HUS1O60921 280 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 CLASP2O75122 1294 aaKnown RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ERVK-10P10266 1014 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 KCNE1P15382 129 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 PTPN3P26045 913 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ADORA2AP29274 412 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 GRIA1P42261 906 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 MAGEA8P43361 318 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 GRIA4P48058 902 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 TPI1P60174 286 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SEMA3BQ13214 749 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SOWAHAQ2M3V2 549 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 LSM12Q3MHD2 195 aaKnown RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SLC9B1Q4ZJI4 515 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 TCHHL1Q5QJ38 904 aaPredicted RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SYCP2LQ5T4T6 812 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 BEND5Q7L4P6 421 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 COLGALT2Q8IYK4 626 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 DEFB106AQ8N104 65 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SIX6OS1Q8N1H7 587 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 C12orf29Q8N999 325 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 TNIP2Q8NFZ5 429 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 COPS5Q92905 334 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ROPN1LQ96C74 230 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 CYP2S1Q96SQ9 504 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 CDRT15Q96T59 188 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 LGMNQ99538 433 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 DDX50Q9BQ39 737 aaKnown RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 FTHL17Q9BXU8 183 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SLC2A11Q9BYW1 496 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 NUF2Q9BZD4 464 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 RBM38Q9H0Z9 239 aaKnown RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 TASP1Q9H6P5 420 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 CNGB3Q9NQW8 809 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 VPS45Q9NRW7 570 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 PNPLA3Q9NST1 481 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 SNTG2Q9NY99 539 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 IPO11Q9UI26 975 aaKnown RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 AK5Q9Y6K8 562 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 MGAMO43451 1857 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 LOC100653049A0A140TA62 436 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 FAM155AB1AL88 458 aaPredicted RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 AIM2O14862 343 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 TPD52L2O43399 206 aaKnown RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 KRT34O76011 436 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 PIGNO95427 931 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 TFAP2AP05549 437 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 IQCF3P0C7M6 154 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ZNF23P17027 643 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 NPR3P17342 541 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ATP5F1P24539 256 aaPredicted RBP8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ADRA1BP35368 520 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 MLH1P40692 756 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 ACADVLP49748 655 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 INHBCP55103 352 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 NUP107P57740 925 aa8.26□□□□□ -1.09
CNTN4-201ENST00000397459 POU4F1Q01851 419 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms