RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 KCTD11Q693B1 232 aa27.99■■■□□ 2.07
CPNE1-203ENST00000397442 TSEN2Q8NCE0 465 aaKnown RBP27.99■■■□□ 2.07
CPNE1-203ENST00000397442 OXNAD1Q96HP4 312 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-203ENST00000397442 FCRL5Q96RD9 977 aa27.99■■■□□ 2.07
CPNE1-203ENST00000397442 NT5MQ9NPB1 228 aa27.99■■■□□ 2.07
CPNE1-203ENST00000397442 ABCB8Q9NUT2 735 aa27.99■■■□□ 2.07
CPNE1-203ENST00000397442 DNAJC17Q9NVM6 304 aaKnown RBP27.99■■■□□ 2.07
CPNE1-203ENST00000397442 UBA2Q9UBT2 640 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-203ENST00000397442 VPS51Q9UID3 782 aa27.99■■■□□ 2.07
CPNE1-203ENST00000397442 SPTBN5Q9NRC6 3674 aaKnown RBP27.98■■■□□ 2.07
CPNE1-203ENST00000397442 E7EVH7 732 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 PLEKHG6Q3KR16 790 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 PARM1Q6UWI2 310 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 ZNF534Q76KX8 674 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 Q7L0L9 218 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 CCDC25Q86WR0 208 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 MFSD6LQ8IWD5 586 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 MCUQ8NE86 351 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 MYLIPQ8WY64 445 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 FGF14Q92915 247 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 FUT8Q9BYC5 575 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 EBF3Q9H4W6 596 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 TTLL3Q9Y4R7 772 aa27.98■■■□□ 2.07
CPNE1-203ENST00000397442 MUSKO15146 869 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 SLC12A1Q13621 1099 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 FNBP1LQ5T0N5 605 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 ELSPBP1Q96BH3 223 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 RBM15Q96T37 977 aaKnown RBP eCLIP27.97■■■□□ 2.072e-7■■■□□ 15.1
CPNE1-203ENST00000397442 CDX2Q99626 313 aaPredicted RBP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 KXD1Q9BQD3 176 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 TSPYL1Q9H0U9 437 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 FBXO10Q9UK96 956 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 OTOL1A6NHN0 477 aaPredicted RBP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 HOXC11O43248 304 aaPredicted RBP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 GRIA1P42261 906 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 MAXP61244 160 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 CDK16Q00536 496 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 RFTN1Q14699 578 aaPredicted RBP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 HIF1AQ16665 826 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 MSS51Q4VC12 460 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 LINGO4Q6UY18 593 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 CAND1Q86VP6 1230 aaKnown RBP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 SPATA22Q8NHS9 363 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 SERPINB12Q96P63 405 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 HPS4Q9NQG7 708 aa27.97■■■□□ 2.07
CPNE1-203ENST00000397442 THG1LQ9NWX6 298 aaKnown RBP27.97■■■□□ 2.07
CPNE1-203ENST00000397442 GRXCR2A6NFK2 248 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 NEBLO76041 1014 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 ADH1CP00326 375 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 ADH5P11766 374 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 CASP8Q14790 479 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 PDGFRLQ15198 375 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 GAB4Q2WGN9 574 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 PITRM1Q5JRX3 1037 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 RELL1Q8IUW5 271 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 ATP2A3Q93084 1043 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 PSKH2Q96QS6 385 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 C2orf49Q9BVC5 232 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-203ENST00000397442 SLC2A11Q9BYW1 496 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 SLC25A51Q9H1U9 297 aa27.96■■■□□ 2.07
CPNE1-203ENST00000397442 E7ESA3 106 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 NFATC1O95644 943 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 AP2A1O95782 977 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 COL4A3Q01955 1670 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 NIPAL4Q0D2K0 466 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 CBLBQ13191 982 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 IHHQ14623 411 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 SLMAPQ14BN4 828 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 CYTH1Q15438 398 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 CCDC85BQ15834 202 aaPredicted RBP27.95■■■□□ 2.07
CPNE1-203ENST00000397442 UAP1Q16222 522 aaPredicted RBP27.95■■■□□ 2.07
CPNE1-203ENST00000397442 FUT11Q495W5 492 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 KIAA0907Q7Z7F0 614 aaPredicted RBP27.95■■■□□ 2.07
CPNE1-203ENST00000397442 NAT16Q8N8M0 369 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 ARRDC2Q8TBH0 407 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 ACDQ96AP0 544 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 IMP4Q96G21 291 aaKnown RBP27.95■■■□□ 2.07
CPNE1-203ENST00000397442 RPP25Q9BUL9 199 aaKnown RBP27.95■■■□□ 2.07
CPNE1-203ENST00000397442 PHACTR1Q9C0D0 580 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 UBP1Q9NZI7 540 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 EPS15L1Q9UBC2 864 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 SEPT3Q9UH03 358 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 GGA2Q9UJY4 613 aa27.95■■■□□ 2.07
CPNE1-203ENST00000397442 AVILO75366 819 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 SUN1O94901 812 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MT-CYBP00156 380 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MAGEA3P43357 314 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 ARL4CP56559 192 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 MTM1Q13496 603 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 GRM2Q14416 872 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 SPARCL1Q14515 664 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 ZNF235Q14590 738 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 ALG1LQ6GMV1 187 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 PRPF39Q86UA1 669 aaKnown RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 ZNF557Q8N988 423 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 FRMD8Q9BZ67 464 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-203ENST00000397442 EPB41L4BQ9H329 900 aa27.94■■■□□ 2.06
CPNE1-203ENST00000397442 SEMA4AQ9H3S1 761 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms