RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 POLR1EQ9GZS1 481 aaKnown RBP11.33□□□□□ -0.6
IFT140-202ENST00000397417 NOP53Q9NZM5 478 aaKnown RBP11.33□□□□□ -0.6
IFT140-202ENST00000397417 CFAP97Q9P2B7 532 aa11.33□□□□□ -0.6
IFT140-202ENST00000397417 BCAP29Q9UHQ4 241 aa11.33□□□□□ -0.6
IFT140-202ENST00000397417 INPP4BO15327 924 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ATG7O95352 703 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 PIGNO95427 931 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 HNF4AP41235 474 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 NR2C2P49116 596 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 UBAP2Q5T6F2 1119 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 CYB5D1Q6P9G0 228 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 YTHDF3Q7Z739 585 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 ZNF567Q8N184 647 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 GRAMD1AQ96CP6 724 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 MED8Q96G25 268 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 DRC3Q9H069 523 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 SLC24A2Q9UI40 661 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 A0A1W2PRU2 124 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 FFAR3O14843 346 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 GPR42O15529 346 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 NOL3O60936 208 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 SERPINB8P50452 374 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 SERPINH1P50454 418 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 PTPRNQ16849 979 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 FAM151BQ6UXP7 276 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 DENND6AQ8IWF6 608 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 TTC9BQ8N6N2 239 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 DIS3LQ8TF46 1054 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 CASP10Q92851 521 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 MAGEB18Q96M61 343 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 OSBPL1AQ9BXW6 950 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 CCDC90BQ9GZT6 254 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 COG4Q9H9E3 785 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ZNHIT2Q9UHR6 403 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 CDYLQ9Y232 598 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 VPS26AO75436 327 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 NFKBIAP25963 317 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 RGS4P49798 205 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 MPP1Q00013 466 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 BCL2L1Q07817 233 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ACAP1Q15027 740 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 AGKQ53H12 422 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 FAM124AQ86V42 546 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 TDRD5Q8NAT2 981 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ARNTL2Q8WYA1 636 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 EBNA1BP2Q99848 306 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 ACAT2Q9BWD1 397 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 CRTAC1Q9NQ79 661 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 THEGQ9P2T0 379 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 SPASTQ9UBP0 616 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 RTN3O95197 1032 aaPredicted RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 IL1BP01584 269 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 SLC1A6P48664 564 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 PKNOX1P55347 436 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 PTPRCAPQ14761 206 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ARHGAP17Q68EM7 881 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ESRP1Q6NXG1 681 aaKnown RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 RIBC1Q8N443 379 aaPredicted RBP11.32□□□□□ -0.6
IFT140-202ENST00000397417 WDTC1Q8N5D0 677 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 TBATAQ96M53 351 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 NAT9Q9BTE0 207 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ASB8Q9H765 288 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 NMRAL1Q9HBL8 299 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 ASAH2Q9NR71 780 aa11.32□□□□□ -0.6
IFT140-202ENST00000397417 COL1A2P08123 1366 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 WNK3Q9BYP7 1800 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 A0A1W2PQ67 120 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 FCHO1O14526 889 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 NCAM2O15394 837 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 PSMD3O43242 534 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 PGAM1P18669 254 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 IGFBP6P24592 240 aaPredicted RBP11.31□□□□□ -0.6
IFT140-202ENST00000397417 PTGIRP43119 386 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 ATXN7L2Q5T6C5 722 aaPredicted RBP11.31□□□□□ -0.6
IFT140-202ENST00000397417 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
IFT140-202ENST00000397417 YIPF2Q9BWQ6 316 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 NDE1Q9NXR1 346 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
IFT140-202ENST00000397417 CD84Q9UIB8 345 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 FCF1Q9Y324 198 aaKnown RBP11.31□□□□□ -0.6
IFT140-202ENST00000397417 FAM186AA6NE01 2351 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 PDZK1P1A8MUH7 402 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 NR5A2O00482 541 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 ENPP3O14638 875 aa11.31□□□□□ -0.6
IFT140-202ENST00000397417 AKAP10O43572 662 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms