RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DRICH1Q6PGQ1 229 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 ZNF687Q8N1G0 1237 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 C12orf50Q8NA57 414 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 CCDC26Q8TAB7 109 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 HTR3CQ8WXA8 447 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 CASKIN2Q8WXE0 1202 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 MAML1Q92585 1016 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 FERMT1Q9BQL6 677 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 LMAN1LQ9HAT1 526 aa24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 FCF1Q9Y324 198 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 MUC22E2RYF6 1773 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-203ENST00000397397 KCNN4O15554 427 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 MTSS1O43312 755 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 SMAD6O43541 496 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 RNF40O75150 1001 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 PHF2O75151 1096 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 TMCC1O94876 653 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 CHRNB1P11230 501 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 VASPP50552 380 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 RENBPP51606 427 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 SLC10A7Q0GE19 358 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 HNRNPDQ14103 355 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 CYTH1Q15438 398 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 MARC1Q5VT66 337 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 METTL3Q86U44 580 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 KCNV2Q8TDN2 545 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 MYO19Q96H55 970 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 ACOX2Q99424 681 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 TMEM121Q9BTD3 319 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 SLC8A2Q9UPR5 921 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 ATG2BQ96BY7 2078 aa24.02■■□□□ 1.44
TSPAN4-203ENST00000397397 NPC1O15118 1278 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 NEBLO76041 1014 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 JCHAINP01591 159 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 KCNJ1P48048 391 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 IFI35P80217 286 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 MRPS21P82921 87 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF235Q14590 738 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 DLG2Q15700 870 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 SERPINA13PQ6UXR4 307 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 TRIM67Q6ZTA4 783 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CHPFQ8IZ52 775 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 BBS5Q8N3I7 341 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 KDM1BQ8NB78 822 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CCDC114Q96M63 670 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CINPQ9BW66 212 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 MFSD1Q9H3U5 465 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CACNA2D2Q9NY47 1150 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 SEPT3Q9UH03 358 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 DRG1Q9Y295 367 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 MYO18AQ92614 2054 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CFAP69A5D8W1 941 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 TTC34A8MYJ7 566 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CCDC188H7C350 402 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 ATP9BO43861 1147 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF189O75820 626 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 ITGAVP06756 1048 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CHRM1P11229 460 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 COILP38432 576 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 IL12RB1P42701 662 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 MMP13P45452 471 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 ZBTB17Q13105 803 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 TTC27Q6P3X3 843 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 C22orf39Q6P5X5 142 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 TEX26Q8N6G2 289 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 FAM71DQ8N9W8 422 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 IL12RB2Q99665 862 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 CEP41Q9BYV8 373 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 USP29Q9HBJ7 922 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 RBM22Q9NW64 420 aaKnown RBP eCLIP24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 STON1Q9Y6Q2 735 aa24.01■■□□□ 1.43
TSPAN4-203ENST00000397397 TECTAO75443 2155 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 WASH3PC4AMC7 463 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 SGK1O00141 431 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 RNF103O00237 685 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 STK10O94804 968 aaKnown RBP24■■□□□ 1.43
TSPAN4-203ENST00000397397 KLF8O95600 359 aaPredicted RBP24■■□□□ 1.43
TSPAN4-203ENST00000397397 PTPN3P26045 913 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 CHRNA3P32297 505 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 WASP42768 502 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 RHOAP61586 193 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 WASHC5Q12768 1159 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 FAM182AQ5T1J6 154 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 CCDC137Q6PK04 289 aaKnown RBP24■■□□□ 1.43
TSPAN4-203ENST00000397397 TRMT11Q7Z4G4 463 aaKnown RBP24■■□□□ 1.43
TSPAN4-203ENST00000397397 SYNPOQ8N3V7 929 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 ALLCQ8N6M5 410 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 ZNF366Q8N895 744 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 SPATA4Q8NEY3 305 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 FLCNQ8NFG4 579 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 PJA1Q8NG27 643 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 RPLP0P6Q8NHW5 317 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 CEP44Q9C0F1 390 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 DDX47Q9H0S4 455 aaKnown RBP24■■□□□ 1.43
TSPAN4-203ENST00000397397 TMEM245Q9H330 911 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 NT5MQ9NPB1 228 aa24■■□□□ 1.43
TSPAN4-203ENST00000397397 PRR33A8MZF0 331 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 HLA-EP13747 358 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 PRKCHP24723 683 aa23.99■■□□□ 1.43
TSPAN4-203ENST00000397397 NTSR1P30989 418 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms