RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 NRF1Q16656 503 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 PQLC1Q8N2U9 271 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 ATPAF2Q8N5M1 289 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 OR6P1Q8NGX9 317 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 COLEC11Q9BWP8 271 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 TRPV6Q9H1D0 765 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 SUDS3Q9H7L9 328 aaPredicted RBP13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 IL1RL2Q9HB29 575 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 RCOR3Q9P2K3 495 aaPredicted RBP13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 DERAQ9Y315 318 aa13.33□□□□□ -0.28
HMBOX1-203ENST00000397358 PSME4Q14997 1843 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 SLC4A1P02730 911 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 CD68P34810 354 aaPredicted RBP13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 SNX17Q15036 470 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ZBTB6Q15916 424 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 CYP2R1Q6VVX0 501 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ARRDC4Q8NCT1 418 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 DCUN1D1Q96GG9 259 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 C11orf84Q9BUA3 381 aaPredicted RBP13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ADAMTS10Q9H324 1103 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ADAM28Q9UKQ2 775 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 A0A1B0GVG6 124 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 KIF3CO14782 793 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 BDNFP23560 247 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 NPY2RP49146 381 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 PRKAA1Q13131 559 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ZNF470Q6ECI4 717 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 CYS1Q717R9 158 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ARHGAP18Q8N392 663 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 IL22Q9GZX6 179 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 CCDC167Q9P0B6 97 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 hCG_2014768A0A024R1R8 64 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 CCL15-CCL14A0A0B4J2E2 113 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 FAM95CA0A1B0GW59 222 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 DCLK1O15075 740 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 AHSGP02765 367 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 JUNP05412 331 aaKnown RBP13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 ARSAP15289 507 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 SLC12A1Q13621 1099 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 CCL15Q16663 113 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 GK5Q6ZS86 529 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 LINC01465Q8N7H1 131 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 EME1Q96AY2 570 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 OXSMQ9NWU1 459 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 SLC2A6Q9UGQ3 507 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
HMBOX1-203ENST00000397358 C15orf38-AP3S2A0A0A6YYH1 394 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ATP6AP2A0A1C7CYW4 349 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ZNF487B1APH4 448 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ATP6AP2O75787 350 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 CYP2B6P20813 491 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 CHN2P52757 468 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 MSLNQ13421 630 aaPredicted RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 PAFAH1B3Q15102 231 aaKnown RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ARPINQ7Z6K5 226 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 PRPF18Q99633 342 aaKnown RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 GRIP2Q9C0E4 1043 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 GBA3Q9H227 469 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 TSPYL2Q9H2G4 693 aaPredicted RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■■■■ 74.6
HMBOX1-203ENST00000397358 CCL22O00626 93 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ZNF195O14628 629 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 STAMBPO95630 424 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 CHRNA4P43681 627 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ITGA7Q13683 1181 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 DPYSQ14117 519 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 DBN1Q16643 649 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 NOMO2Q5JPE7 1267 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 C6orf52Q5T4I8 152 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 PPHLN1Q8NEY8 458 aaKnown RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 POMKQ9H5K3 350 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 DNAJB4Q9UDY4 337 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ME2P23368 584 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 AFF1P51825 1210 aaKnown RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 MTTPP55157 894 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 DAOAP59103 153 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 AGKQ53H12 422 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 TMEM135Q86UB9 458 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 FAM35AQ86V20 835 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 SCN4BQ8IWT1 228 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 SPATA16Q9BXB7 569 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 MRPL1Q9BYD6 325 aaKnown RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 DDX18Q9NVP1 670 aaKnown RBP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 EPS15L1Q9UBC2 864 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 PSMD13Q9UNM6 376 aa13.31□□□□□ -0.28
HMBOX1-203ENST00000397358 NRCAMQ92823 1304 aa13.3□□□□□ -0.28
HMBOX1-203ENST00000397358 MAGEB16A2A368 324 aa13.3□□□□□ -0.28
HMBOX1-203ENST00000397358 TMEM114B3SHH9 223 aa13.3□□□□□ -0.28
HMBOX1-203ENST00000397358 GPR32O75388 356 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms