RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 NSMCE1Q8WV22 266 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 PTPRN2Q92932 1015 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 PBKQ96KB5 322 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 CCDC114Q96M63 670 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 LRFN3Q9BTN0 628 aa16.73■□□□□ 0.27
AP1S3-202ENST00000396653 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
AP1S3-202ENST00000396653 PLXND1Q9Y4D7 1925 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 CES2O00748 559 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 ENC1O14682 589 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 ALOX15BO15296 676 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 LAMTOR5O43504 91 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 SMAD6O43541 496 aaKnown RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 TMCC1O94876 653 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 MAP3K6O95382 1288 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 PEX11BO96011 259 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 GSRP00390 522 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 ATP1A1P05023 1023 aaKnown RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 COL9A1P20849 921 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 HSPA9P38646 679 aaKnown RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 XRCC4Q13426 336 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 ELAVL3Q14576 367 aaKnown RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 NOMO1Q15155 1222 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 LLGL1Q15334 1064 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 CCDC181Q5TID7 509 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 CCDC13Q8IYE1 715 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 C17orf53Q8N3J3 647 aaPredicted RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 TSTD1Q8NFU3 115 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 OR2T3Q8NH03 318 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 MAML1Q92585 1016 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 PRSS16Q9NQE7 514 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 C2orf42Q9NWW7 574 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 FBXO4Q9UKT5 387 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 FCF1Q9Y324 198 aaKnown RBP16.72■□□□□ 0.27
AP1S3-202ENST00000396653 ANKRD36A6QL64 1941 aa16.72■□□□□ 0.27
AP1S3-202ENST00000396653 HACD1B0YJ81 288 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 K7ERQ8 282 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 K7ESF4 209 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 MATN3O15232 486 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 SIN3BO75182 1162 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ZNF821O75541 412 aaPredicted RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ZNF189O75820 626 aaPredicted RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ALDH1A2O94788 518 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 APBB3O95704 486 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 HNRNPDQ14103 355 aaKnown RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 LBRQ14739 615 aaKnown RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 PRKD1Q15139 912 aaPredicted RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ACCSLQ4AC99 568 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 C9orf64Q5T6V5 341 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 KIAA1211LQ6NV74 962 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 Q6ZVU0 165 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 BBS5Q8N3I7 341 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ZNF366Q8N895 744 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ACTL9Q8TC94 416 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 MAIP1Q8WWC4 291 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 WDR24Q96S15 920 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 NAPGQ99747 312 aaPredicted RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 FRMD8P1Q9BZ68 369 aaPredicted RBP16.71■□□□□ 0.27
AP1S3-202ENST00000396653 LHX3Q9UBR4 397 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 SEPT3Q9UH03 358 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 AMACRQ9UHK6 382 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 SNX12Q9UMY4 172 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 ACTL7AQ9Y615 435 aa16.71■□□□□ 0.27
AP1S3-202ENST00000396653 EML5Q05BV3 1969 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 CCDC163A0A0D9SF12 145 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 TCRBV21S2A2A0A5A6 115 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 MCF2LO15068 1137 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 MTSS1O43312 755 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 PRLRP16471 622 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 TCP1P17987 556 aaKnown RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 RECQLP46063 649 aaPredicted RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 RENBPP51606 427 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 COPAP53621 1224 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 RHOAP61586 193 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 SNRPD1P62314 119 aaKnown RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 ETF1P62495 437 aaKnown RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 OTUD4Q01804 1114 aaKnown RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 CYTH1Q15438 398 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 CARD16Q5EG05 197 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 PAPD7Q5XG87 772 aaKnown RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 RASGEF1CQ8N431 466 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 TEX26Q8N6G2 289 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 OR2AP1Q8NGE2 309 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 TFB1MQ8WVM0 346 aaKnown RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 OR8D1Q8WZ84 308 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 HAUS1Q96CS2 278 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 GDAP1L1Q96MZ0 367 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 QKIQ96PU8 341 aaKnown RBP eCLIP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 PSKH2Q96QS6 385 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 HHIPQ96QV1 700 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 OSBPL9Q96SU4 736 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 CINPQ9BW66 212 aaPredicted RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 RSPH9Q9H1X1 276 aaPredicted RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 SAE1Q9UBE0 346 aaPredicted RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 EBF1Q9UH73 591 aa16.7■□□□□ 0.26
AP1S3-202ENST00000396653 TTC7AQ9ULT0 858 aaPredicted RBP16.7■□□□□ 0.26
AP1S3-202ENST00000396653 FARP1Q9Y4F1 1045 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms