RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 LMX1AQ8TE12 382 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 GLMNQ92990 594 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 NAT6Q93015 286 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 LENG8Q96PV6 779 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 IL12RB2Q99665 862 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SLC17A9Q9BYT1 436 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 SEPT3Q9UH03 358 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 HS3ST2Q9Y278 367 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-202ENST00000396629 FLNCQ14315 2725 aa8.64□□□□□ -1.03
SCFD1-202ENST00000396629 M0QYV0 167 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 KPNA3O00505 521 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 MUSKO15146 869 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 RAD51BO15315 384 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SART1O43290 800 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 PPFIA2O75334 1257 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 LIPCP11150 499 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 JUNDP17535 347 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 CR2P20023 1033 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TBXAS1P24557 533 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 EIF2B5Q13144 721 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SPIDRQ14159 915 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 EDRF1Q3B7T1 1238 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TPRG1LQ5T0D9 272 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 KIAA1161Q6NSJ0 714 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 FBXL22Q6P050 247 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SLC35F3Q8IY50 421 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 BTN2A2Q8WVV5 523 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 RNF34Q969K3 372 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TBATAQ96M53 351 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 CCDC3Q9BQI4 270 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TRIM62Q9BVG3 475 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SLC25A18Q9H1K4 315 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 DYRK4Q9NR20 520 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 GEMIN8Q9NWZ8 242 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 USP25Q9UHP3 1055 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SLC12A6Q9UHW9 1150 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TLN1Q9Y490 2541 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TEX15Q9BXT5 2789 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TMX2-CTNND1H3BSU7 103 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 NVLO15381 856 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SPINT1O43278 529 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 BNIP3LO60238 219 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TRUB2O95900 331 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 PAK4O96013 591 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 MT-CO1P00395 513 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 PRNPP04156 253 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 ME1P48163 572 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 RPS21P63220 83 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SERINC3Q13530 473 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 GSE1Q14687 1217 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TMEM270Q6UE05 265 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 RAB11FIP2Q7L804 512 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 ZSCAN30Q86W11 494 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 CHST14Q8NCH0 376 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 FAM149B1Q96BN6 582 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 CCDC114Q96M63 670 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 PSMB7Q99436 277 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 KLF6Q99612 283 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 UPF2Q9HAU5 1272 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 SPASTQ9UBP0 616 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 IPO11Q9UI26 975 aaKnown RBP8.63□□□□□ -1.03
SCFD1-202ENST00000396629 PADI4Q9UM07 663 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 MAPK8IP1Q9UQF2 711 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 TBC1D30Q9Y2I9 924 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
SCFD1-202ENST00000396629 LMO7DNF2Z398 122 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 AP1G1O43747 822 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 GCATO75600 419 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 EPB41P11171 864 aaKnown RBP8.62□□□□□ -1.03
SCFD1-202ENST00000396629 GPD2P43304 727 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 ACADSBP45954 432 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 IRAK1P51617 712 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 PFN3P60673 137 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 PITX1P78337 314 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-202ENST00000396629 PDE1CQ14123 709 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-202ENST00000396629 MORC3Q14149 939 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 C5orf22Q49AR2 442 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 ARSIQ5FYB1 569 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 B3GNT8Q7Z7M8 397 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 JAMLQ86YT9 394 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 ASB12Q8WXK4 309 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 CCDC47Q96A33 483 aaKnown RBP8.62□□□□□ -1.03
SCFD1-202ENST00000396629 FEM1CQ96JP0 617 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 FUCA2Q9BTY2 467 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 POPDC2Q9HBU9 364 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 EPB41L5Q9HCM4 733 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 VPS28Q9UK41 221 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 PCDHB4Q9Y5E5 795 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 FADS3Q9Y5Q0 445 aa8.62□□□□□ -1.03
SCFD1-202ENST00000396629 FPGTO14772 594 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CETN3O15182 167 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CLDN11O75508 207 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CALCAP01258 141 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 SLC2A3P11169 496 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 WT1P19544 449 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CCKBRP32239 447 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms