RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ZNF397Q8NF99 534 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 WDR48Q8TAF3 677 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 NELFBQ8WX92 580 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 CPXM1Q96SM3 734 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 CEP44Q9C0F1 390 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 WDCPQ9H6R7 721 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 CA5BQ9Y2D0 317 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 PCDHB1Q9Y5F3 818 aa17.91■□□□□ 0.46
EXOSC3-202ENST00000396521 SYNJ2BP-COX16A0A087WUM0 186 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 K7ESM1 405 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 M0QYT0 321 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 AP1G1O43747 822 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 CSF2P04141 144 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 CTSLP07711 333 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 RBMS1P29558 406 aaKnown RBP17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 PTK2Q05397 1052 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 KYAT3Q6YP21 454 aaKnown RBP17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 Q6ZSR6 202 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 OR52K2Q8NGK3 314 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 MAPK15Q8TD08 544 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 SLC17A9Q9BYT1 436 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 SIK2Q9H0K1 926 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 GPR27Q9NS67 375 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 DNAJC28Q9NX36 388 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 COX16Q9P0S2 106 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 IL36AQ9UHA7 158 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 VPS51Q9UID3 782 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 SALL4Q9UJQ4 1053 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 MAN1B1Q9UKM7 699 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 STAP1Q9ULZ2 295 aa17.9■□□□□ 0.46
EXOSC3-202ENST00000396521 SPTY2D1-AS1A0A0U1RR47 76 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 DRGXA6NNA5 263 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 PPP1R3GB7ZBB8 358 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 TPP1O14773 563 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 DAB1O75553 588 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 ZIC2O95409 532 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 MT-CO1P00395 513 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 NME1P15531 152 aaKnown RBP17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 CD44P16070 742 aaKnown RBP17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 CXCR3P49682 368 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 NEK3P51956 506 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 SLC6A3Q01959 620 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 VAC14Q08AM6 782 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 ISXQ2M1V0 245 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 PCSK4Q6UW60 755 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 OLFML1Q6UWY5 402 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 GCNT7Q6ZNI0 430 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 PARGQ86W56 976 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 WDTC1Q8N5D0 677 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 BTN2A2Q8WVV5 523 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 ASB12Q8WXK4 309 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 PGAP3Q96FM1 320 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 LENG8Q96PV6 779 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 MYOCQ99972 504 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 SYNCQ9H7C4 482 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 ARHGEF38Q9NXL2 777 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 SSUH2Q9Y2M2 353 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 PCDHGA8Q9Y5G5 932 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 COL6A6A6NMZ7 2263 aa17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 TP53BP1Q12888 1972 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-202ENST00000396521 ILVBLA1L0T0 632 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 KLK10O43240 276 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 TCEA3O75764 348 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 ITGB7P26010 798 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 KRT9P35527 623 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 USP8P40818 1118 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 RPIAP49247 311 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 NUMBP49757 651 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 PAK1Q13153 545 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 SGCGQ13326 291 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 ARSIQ5FYB1 569 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 OR6B2Q6IFH4 312 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 TRIM65Q6PJ69 517 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 PTAR1Q7Z6K3 402 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 C14orf80Q86SX3 495 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 PLPP6Q8IY26 295 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 SLC22A18ASQ8N1D0 253 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 PCDH20Q8N6Y1 951 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 IFI44Q8TCB0 444 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 SHC3Q92529 594 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 KLK6Q92876 244 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 GLMNQ92990 594 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 RAB7BQ96AH8 199 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 ARRDC3Q96B67 414 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 BMFQ96LC9 184 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 PSMB7Q99436 277 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 TKTL2Q9H0I9 626 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 ASCL3Q9NQ33 180 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 APEX2Q9UBZ4 518 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 IPO11Q9UI26 975 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 ZFR2Q9UPR6 939 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 MYLKQ15746 1914 aa17.88■□□□□ 0.45
EXOSC3-202ENST00000396521 GTPBP10A4D1E9 387 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 FPGTO14772 594 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 TSPAN6O43657 245 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 SNAP91O60641 907 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 GRAP2O75791 330 aa17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
EXOSC3-202ENST00000396521 RRM1P23921 792 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms