RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 EYSQ5T1H1 3165 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 A0A0A0MRY4 1105 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 C5orf60A6NFR6 353 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 OTOL1A6NHN0 477 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 RNF103O00237 685 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 KAT7O95251 611 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 VAV1P15498 845 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 MMP13P45452 471 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ST8SIA6P61647 398 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ECT2LQ008S8 904 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ARHGEF18Q6ZSZ5 1173 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 OR52K2Q8NGK3 314 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 SPATA13Q96N96 652 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 CEP44Q9C0F1 390 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 KLHL8Q9P2G9 620 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ADAM21Q9UKJ8 722 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 CLEC4EQ9ULY5 219 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 HS3ST2Q9Y278 367 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 UTP11Q9Y3A2 253 aaKnown RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ERLIN1O75477 346 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 GCATO75600 419 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ZMPSTE24O75844 475 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 IFNB1P01574 187 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 IVLP07476 585 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 DLDP09622 509 aaKnown RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 DRD1P21728 446 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 CES1P23141 567 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 PTPN3P26045 913 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 TNFRSF4P43489 277 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 KCNJ1P48048 391 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 SERPINH1P50454 418 aaKnown RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ARF5P84085 180 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 PRKCQQ04759 706 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 PTK6Q13882 451 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ZSCAN26Q16670 478 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 TEX44Q53QW1 395 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 RALGPS1Q5JS13 557 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ARHGAP36Q6ZRI8 547 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 ADIPOR2Q86V24 386 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 JAMLQ86YT9 394 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 TP53INP2Q8IXH6 220 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 APCDD1Q8J025 514 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 TEX26Q8N6G2 289 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 FAM71DQ8N9W8 422 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 RUBCNQ92622 972 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 SHDQ96IW2 340 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 IL12RB2Q99665 862 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 CIPCQ9C0C6 399 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 POLR1EQ9GZS1 481 aaKnown RBP10.06□□□□□ -0.8
DDX39B-202ENST00000396172 HEBP1Q9NRV9 189 aa10.06□□□□□ -0.8
DDX39B-202ENST00000396172 PRUNE2Q8WUY3 3088 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 NCOR1O75376 2440 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 TBC1D3BA6NDS4 549 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 J3KR12 359 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 KCNK1O00180 336 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 KRT14P02533 472 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 FDFT1P37268 417 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 MAPK8P45983 427 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 GRSF1Q12849 480 aaKnown RBP eCLIP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 MLF2Q15773 248 aaPredicted RBP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 GEN1Q17RS7 908 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 FBXO43Q4G163 708 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 ASTLQ6HA08 431 aaPredicted RBP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 TRMT11Q7Z4G4 463 aaKnown RBP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 CCDC33Q8N5R6 958 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 NETO2Q8NC67 525 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 BBOF1Q8ND07 529 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 KCNV2Q8TDN2 545 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 ISG20Q96AZ6 181 aaKnown RBP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 USP29Q9HBJ7 922 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 ELOVL2Q9NXB9 296 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 INTS6Q9UL03 887 aaKnown RBP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
DDX39B-202ENST00000396172 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
DDX39B-202ENST00000396172 SNAP91O60641 907 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 TMCC1O94876 653 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SLC6A11P48066 632 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PRPSAP1Q14558 356 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SLC14A2Q15849 920 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ANKRD20A2Q5SQ80 823 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ANKRD20A1Q5TYW2 823 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ANKRD20A3Q5VUR7 823 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 TPRG1Q6ZUI0 275 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PCGF5Q86SE9 256 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 SH2D3CQ8N5H7 860 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PCDH20Q8N6Y1 951 aaKnown RBP10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ATP11CQ8NB49 1132 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 TEKT5Q96M29 485 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 PSKH2Q96QS6 385 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 FAM129AQ9BZQ8 928 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 GBA3Q9H227 469 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 RBM22Q9NW64 420 aaKnown RBP eCLIP10.04□□□□□ -0.87e-7■■■■■ 36.7
DDX39B-202ENST00000396172 WNT16Q9UBV4 365 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 ERVW-1Q9UQF0 538 aa10.04□□□□□ -0.8
DDX39B-202ENST00000396172 XIRP2A4UGR9 3374 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms