RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 DUSP16Q9BY84 665 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 MRPL40Q9NQ50 206 aaKnown RBP13.78□□□□□ -0.2
C15orf39-202ENST00000394987 RIC8BQ9NVN3 520 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 GALNT8Q9NY28 637 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 CCNB1P14635 433 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 NDUFV1P49821 464 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 GALK1P51570 392 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 LILRA4P59901 499 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 SAPCD2Q86UD0 394 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 ZNF333Q96JL9 665 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 ZFYVE19Q96K21 471 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 COPS7BQ9H9Q2 264 aaPredicted RBP13.78□□□□□ -0.2
C15orf39-202ENST00000394987 EXOSC4Q9NPD3 245 aaKnown RBP13.78□□□□□ -0.2
C15orf39-202ENST00000394987 TMEM161AQ9NX61 479 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 FBXW4P57775 412 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 TTC27Q6P3X3 843 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 GPR141Q7Z602 305 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 ECSITQ9BQ95 431 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 POLR1EQ9GZS1 481 aaKnown RBP13.78□□□□□ -0.2
C15orf39-202ENST00000394987 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 TRHDEQ9UKU6 1024 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 SEPT4O43236 478 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 CCNT2O60583 730 aaKnown RBP13.78□□□□□ -0.2
C15orf39-202ENST00000394987 BAIAP3O94812 1187 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 ABL2P42684 1182 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 HDAC4P56524 1084 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 JAM2P57087 298 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 MBTD1Q05BQ5 628 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 TBL3Q12788 808 aaKnown RBP13.78□□□□□ -0.2
C15orf39-202ENST00000394987 GRIK3Q13003 919 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 TTC7BQ86TV6 843 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 SPATA6LQ8N4H0 392 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
C15orf39-202ENST00000394987 ADGRA3Q8IWK6 1321 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 CAPN15O75808 1086 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 GABRR2P28476 465 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.2
C15orf39-202ENST00000394987 NAGLUP54802 743 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 NR6A1Q15406 480 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 UGT3A1Q6NUS8 523 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.2
C15orf39-202ENST00000394987 ANKS3Q6ZW76 656 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 SYTL1Q8IYJ3 562 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 FAM13CQ8NE31 585 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 WDR60Q8WVS4 1066 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 B3GALT6Q96L58 329 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 SYTL2Q9HCH5 934 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.2
C15orf39-202ENST00000394987 CILPO75339 1184 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 CXCL14O95715 111 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 DLGAP3O95886 979 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 TSPAN8P19075 237 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 CDC16Q13042 620 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 OTUD3Q5T2D3 398 aaPredicted RBP13.77□□□□□ -0.21
C15orf39-202ENST00000394987 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.21
C15orf39-202ENST00000394987 C17orf80Q9BSJ5 609 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 FTHL17Q9BXU8 183 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 ZDHHC6Q9H6R6 413 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 SLX4Q8IY92 1834 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 PAPSS1O43252 624 aaPredicted RBP13.77□□□□□ -0.21
C15orf39-202ENST00000394987 LRCH4O75427 683 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 CD48P09326 243 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 CTBP1Q13363 440 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 PABPC1LQ4VXU2 614 aaKnown RBP13.77□□□□□ -0.21
C15orf39-202ENST00000394987 AGKQ53H12 422 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 LRRC8BQ6P9F7 803 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 EZH1Q92800 747 aaPredicted RBP13.77□□□□□ -0.21
C15orf39-202ENST00000394987 MYOCQ99972 504 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 ST6GALNAC4Q9H4F1 302 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 RMI1Q9H9A7 625 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 GID8Q9NWU2 228 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 NHSQ6T4R5 1651 aa13.77□□□□□ -0.21
C15orf39-202ENST00000394987 TLL1O43897 1013 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 XYLBO75191 536 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 APOA4P06727 396 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 WASHC2DQ5SRD0 308 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 ARMC12Q5T9G4 340 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 NANOGNBQ7Z5D8 188 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 PSTKQ8IV42 348 aaKnown RBP13.76□□□□□ -0.21
C15orf39-202ENST00000394987 CCDC103Q8IW40 242 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 ZBED3Q96IU2 234 aaPredicted RBP13.76□□□□□ -0.21
C15orf39-202ENST00000394987 TBL1YQ9BQ87 522 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 TTPALQ9BTX7 342 aa13.76□□□□□ -0.21
C15orf39-202ENST00000394987 PCDH18Q9HCL0 1135 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms