RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LLGL1Q15334 1064 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 POM121L1PQ3SYA9 428 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 PLK5Q496M5 336 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 DPY19L3Q6ZPD9 716 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 ASCL5Q7RTU5 278 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 DEFB119Q8N690 84 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 OR6K2Q8NGY2 324 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
SNCA-203ENST00000394986 RNF157Q96PX1 679 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 CEP44Q9C0F1 390 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 DUSP15Q9H1R2 295 aaPredicted RBP20.28■□□□□ 0.84
SNCA-203ENST00000394986 SP110Q9HB58 689 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 ITM2CQ9NQX7 267 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 UBA2Q9UBT2 640 aaPredicted RBP20.28■□□□□ 0.84
SNCA-203ENST00000394986 IPO11Q9UI26 975 aaKnown RBP20.28■□□□□ 0.84
SNCA-203ENST00000394986 SARDHQ9UL12 918 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 CAPN6Q9Y6Q1 641 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 CHD5Q8TDI0 1954 aa20.28■□□□□ 0.84
SNCA-203ENST00000394986 PLK4O00444 970 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 MCF2LO15068 1137 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 LMNAP02545 664 aaKnown RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 SERPINB6P35237 376 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 ODF2Q5BJF6 829 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 ATXN7L2Q5T6C5 722 aaPredicted RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 METTL3Q86U44 580 aaKnown RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 PCDH20Q8N6Y1 951 aaKnown RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 KIAA1524Q8TCG1 905 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 GRIN3AQ8TCU5 1115 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 PDLIM2Q96JY6 352 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 CALR3Q96L12 384 aaKnown RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 ZNF830Q96NB3 372 aaPredicted RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 PABPC3Q9H361 631 aaKnown RBP20.27■□□□□ 0.84
SNCA-203ENST00000394986 GUCA1BQ9UMX6 200 aa20.27■□□□□ 0.84
SNCA-203ENST00000394986 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 CXorf51AA0A1B0GTR3 108 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 PRR23AA6NEV1 266 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 MAP3K13O43283 966 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 FTCDO95954 541 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 PTMAP06454 111 aaKnown RBP20.27■□□□□ 0.83
SNCA-203ENST00000394986 C7P10643 843 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 GKP32189 559 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 SLC8A1P32418 973 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 RECQLP46063 649 aaPredicted RBP20.27■□□□□ 0.83
SNCA-203ENST00000394986 GBE1Q04446 702 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 BYSLQ13895 437 aaKnown RBP20.27■□□□□ 0.83
SNCA-203ENST00000394986 PAFAH1B3Q15102 231 aaKnown RBP20.27■□□□□ 0.83
SNCA-203ENST00000394986 CYTH1Q15438 398 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 CARD16Q5EG05 197 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 ARMCX6Q7L4S7 300 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 TMEFF1Q8IYR6 380 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 AADATQ8N5Z0 425 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 PIP4K2CQ8TBX8 421 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 LRRN4Q8WUT4 740 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 FAM122AQ96E09 287 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 TOE1Q96GM8 510 aaKnown RBP20.27■□□□□ 0.83
SNCA-203ENST00000394986 EXOC2Q96KP1 924 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 CCDC114Q96M63 670 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 KCNF1Q9H3M0 494 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 SEMA4AQ9H3S1 761 aa20.27■□□□□ 0.83
SNCA-203ENST00000394986 A0A1W2PP55 124 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 NRDCO43847 1150 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 CCDC175P0C221 793 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 CHRNA3P32297 505 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 CTNNA1P35221 906 aaKnown RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 PLA2G5P39877 138 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 CCNHP51946 323 aaPredicted RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 RHOAP61586 193 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 DYNLT1P63172 113 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 RPL6Q02878 288 aaKnown RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 ZBTB16Q05516 673 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 IL10RBQ08334 325 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 TTC31Q49AM3 519 aaPredicted RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 SPOCD1Q6ZMY3 1216 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 RFX6Q8HWS3 928 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 KATNAL2Q8IYT4 538 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 RYBPQ8N488 228 aaPredicted RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 ATPAF2Q8N5M1 289 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 PLD5Q8N7P1 536 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 GANCQ8TET4 914 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 ISG20Q96AZ6 181 aaKnown RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 LZTFL1Q9NQ48 299 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 FBXL12Q9NXK8 326 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 LHX3Q9UBR4 397 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 RAB23Q9ULC3 237 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 PPM1HQ9ULR3 514 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 PACSIN2Q9UNF0 486 aaPredicted RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 WASF2Q9Y6W5 498 aa20.26■□□□□ 0.83
SNCA-203ENST00000394986 ZFHX2Q9C0A1 2572 aaPredicted RBP20.26■□□□□ 0.83
SNCA-203ENST00000394986 NYNRINQ9P2P1 1898 aaKnown RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 ALOX15BO15296 676 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 MAFKO60675 156 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 RNASEH2AO75792 299 aaKnown RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 ADH1BP00325 375 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 IGLV3-19P01714 112 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 KRT10P13645 584 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 CD6P30203 668 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 CDKN2BP42772 138 aa20.25■□□□□ 0.83
SNCA-203ENST00000394986 SLC10A2Q12908 348 aaPredicted RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 IFI16Q16666 785 aaKnown RBP20.25■□□□□ 0.83
SNCA-203ENST00000394986 INO80DQ53TQ3 878 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms