RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 NME5P56597 212 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 DCTN2Q13561 401 aaKnown RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 SEMA5AQ13591 1074 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 MOGSQ13724 837 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 ZNF554Q86TJ5 538 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 DCP1BQ8IZD4 617 aaKnown RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 SCAMP5Q8TAC9 235 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 ZFAND2BQ8WV99 257 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 C17orf50Q8WW18 174 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 PRR11Q96HE9 360 aaPredicted RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 IL22Q9GZX6 179 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 IL1RL2Q9HB29 575 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 UTP6Q9NYH9 597 aaKnown RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 PRKAG3Q9UGI9 489 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 SLC12A8A0AV02 714 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 ALOX15P16050 662 aaPredicted RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 PTPN3P26045 913 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 EPHA3P29320 983 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 EIF2B2P49770 351 aaKnown RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 DAOAP59103 153 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 ATP1A4Q13733 1029 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 PRKD1Q15139 912 aaPredicted RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 DDR2Q16832 855 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 CCDC153Q494R4 210 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 LZICQ8WZA0 190 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 PHF12Q96QT6 1004 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 WDR55Q9H6Y2 383 aaPredicted RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 GPAMQ9HCL2 828 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 TBC1D23Q9NUY8 699 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 NSMCE4AQ9NXX6 385 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 PLA2G4CQ9UP65 541 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 IRF1P10914 325 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 NPY2RP49146 381 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 MTTPP55157 894 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 FAM83EQ2M2I3 478 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 CTXN3Q4LDR2 81 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 LIN52Q52LA3 116 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 TEX44Q53QW1 395 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 RIPOR1Q6ZS17 1223 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 TMC7Q7Z402 723 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 GALNT4Q8N4A0 578 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 FCRL2Q96LA5 508 aaPredicted RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 GLT1D1Q96MS3 346 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 TBL1YQ9BQ87 522 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 ACE2Q9BYF1 805 aaPredicted RBP10.7□□□□□ -0.7
CALD1-203ENST00000393118 CNTN3Q9P232 1028 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 APPL1Q9UKG1 709 aa10.7□□□□□ -0.7
CALD1-203ENST00000393118 ARL5CA6NH57 179 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 PLIN3O60664 434 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 ENDOD1O94919 500 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 IL4RP24394 825 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 MSX2P35548 267 aaPredicted RBP10.69□□□□□ -0.7
CALD1-203ENST00000393118 PCBP1Q15365 356 aaKnown RBP eCLIP10.69□□□□□ -0.7
CALD1-203ENST00000393118 TBCCQ15814 346 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 TRMT5Q32P41 509 aaKnown RBP10.69□□□□□ -0.7
CALD1-203ENST00000393118 TNFAIP8L3Q5GJ75 292 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 MARC1Q5VT66 337 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 ARCQ7LC44 396 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 SNX32Q86XE0 403 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 GRIP2Q9C0E4 1043 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 LNPEPQ9UIQ6 1025 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 PRRC2BQ5JSZ5 2229 aaKnown RBP10.69□□□□□ -0.7
CALD1-203ENST00000393118 SIPA1L1O43166 1804 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 MAGEB16A2A368 324 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 TRIM43BA6NCK2 446 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 SCAMP3O14828 347 aaKnown RBP10.69□□□□□ -0.7
CALD1-203ENST00000393118 ITM2AO43736 263 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 GMNNO75496 209 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 DDHD2O94830 711 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 F2P00734 622 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 PIRTP0C851 137 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 SLC18A1P54219 525 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 FLOT2Q14254 428 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 MYBPC3Q14896 1274 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 GALNTL6Q49A17 601 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 PLEKHG4Q58EX7 1191 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 GSTCDQ8NEC7 633 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 DQX1Q8TE96 717 aaKnown RBP10.69□□□□□ -0.7
CALD1-203ENST00000393118 KLHL5Q96PQ7 755 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 TRPV6Q9H1D0 765 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 RRN3Q9NYV6 651 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 COPG2Q9UBF2 871 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 PADI3Q9ULW8 664 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 CRYL1Q9Y2S2 319 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 RBMX2Q9Y388 322 aaKnown RBP10.69□□□□□ -0.7
CALD1-203ENST00000393118 FAM95CA0A1B0GW59 222 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 A6NHS1 94 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 LYNP07948 512 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 TSPAN8P19075 237 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 CD151P48509 253 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 PGGT1BP53609 377 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 INHBEP58166 350 aa10.69□□□□□ -0.7
CALD1-203ENST00000393118 TIGD5Q53EQ6 642 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms