RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 C19orf43Q9BQ61 176 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 CCDC163A0A0D9SF12 145 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 ESPNB1AK53 854 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 GPR37L1O60883 481 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 FGGP02679 453 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 NTSR1P30989 418 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 GJC1P36383 396 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 LMNB2Q03252 620 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 WASHC5Q12768 1159 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 LBRQ14739 615 aaKnown RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 SPEM1Q8N4L4 309 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 NECAB3Q96P71 396 aaPredicted RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 NUDCD1Q96RS6 583 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 UBA2Q9UBT2 640 aaPredicted RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 CA14Q9ULX7 337 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 SCML1Q9UN30 329 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 ADAM23O75077 832 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 PHF2O75151 1096 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 VAV1P15498 845 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 SUOXP51687 545 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 ZBTB16Q05516 673 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 KDSRQ06136 332 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 SEPT3Q9UH03 358 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 R3HDM2Q9Y2K5 976 aaKnown RBP13.51□□□□□ -0.25
USP44-202ENST00000393091 PPIL1Q9Y3C6 166 aa13.51□□□□□ -0.25
USP44-202ENST00000393091 A0A1W2PQ67 120 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 J3KR12 359 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 TRIM24O15164 1050 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 CHRNA3P32297 505 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 C22orf39Q6P5X5 142 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 RASSF3Q86WH2 238 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 TP53INP2Q8IXH6 220 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 PTPRN2Q92932 1015 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 ZNF419Q96HQ0 510 aaPredicted RBP13.5□□□□□ -0.25
USP44-202ENST00000393091 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 EBF1Q9UH73 591 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 A0A1W2PQF6 199 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 MCF2LO15068 1137 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 CEP104O60308 925 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 ZNF528Q3MIS6 628 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 TEX44Q53QW1 395 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 EGFLAMQ63HQ2 1017 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 ARHGAP36Q6ZRI8 547 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 ALLCQ8N6M5 410 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 HTR3CQ8WXA8 447 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 TEKT5Q96M29 485 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 FBXL21Q9UKT6 434 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 STON1Q9Y6Q2 735 aa13.5□□□□□ -0.25
USP44-202ENST00000393091 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 TNNT1P13805 278 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 CTSOP43234 321 aaPredicted RBP13.49□□□□□ -0.25
USP44-202ENST00000393091 AP1S1P61966 158 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 LONRF2Q1L5Z9 754 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 CAMKK1Q8N5S9 505 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 ECHDC3Q96DC8 303 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 OSBPL1AQ9BXW6 950 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 SNAP91O60641 907 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 OPHN1O60890 802 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 TMCC1O94876 653 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 CCNB1P14635 433 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 GLDCP23378 1020 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 PTPN3P26045 913 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 EIF3EP60228 445 aaKnown RBP13.49□□□□□ -0.25
USP44-202ENST00000393091 CKAP4Q07065 602 aaKnown RBP13.49□□□□□ -0.25
USP44-202ENST00000393091 BYSLQ13895 437 aaKnown RBP13.49□□□□□ -0.25
USP44-202ENST00000393091 IL31Q6EBC2 164 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 SFTPA1Q8IWL2 248 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 PGBD5Q8N414 524 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 ST13P5Q8NFI4 369 aaPredicted RBP13.49□□□□□ -0.25
USP44-202ENST00000393091 HEMGNQ9BXL5 484 aa13.49□□□□□ -0.25
USP44-202ENST00000393091 FEZ2Q9UHY8 353 aaPredicted RBP13.49□□□□□ -0.25
USP44-202ENST00000393091 IL12RB1P42701 662 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 COPAP53621 1224 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 CARD16Q5EG05 197 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 CELF6Q96J87 481 aaKnown RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 ZNF641Q96N77 438 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 FCRL5Q96RD9 977 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 SP110Q9HB58 689 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 SIT1Q9Y3P8 196 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 MTF2Q9Y483 593 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 HTRA2O43464 458 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 SOCS5O75159 536 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 PRKCHP24723 683 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 RPL26P61254 145 aaKnown RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 NCEH1Q6PIU2 408 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 OR2A12Q8NGT7 310 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 ATL2Q8NHH9 583 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 ARRDC2Q8TBH0 407 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 IMP4Q96G21 291 aaKnown RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 C16orf45Q96MC5 204 aaPredicted RBP13.48□□□□□ -0.25
USP44-202ENST00000393091 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 LMAN1LQ9HAT1 526 aa13.48□□□□□ -0.25
USP44-202ENST00000393091 RPL26L1Q9UNX3 145 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms