RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TSNQ15631 228 aaKnown RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 ALFQ53S48 1182 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 AAGABQ6PD74 315 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 KRT73Q86Y46 540 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 SLC41A1Q8IVJ1 513 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 SFRP1Q8N474 314 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 LENG9Q96B70 501 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 SPRTNQ9H040 489 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 NUAK2Q9H093 628 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 ABHD16BQ9H3Z7 469 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 CATSPERZQ9NTU4 200 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 SMPD4Q9NXE4 827 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 NUDT5Q9UKK9 219 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 GTF2A1LQ9UNN4 478 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 MTF2Q9Y483 593 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 SESN1Q9Y6P5 492 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 KPNA6O60684 536 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 OR56A5P0C7T3 313 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 CLCN5P51795 746 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 GRIK3Q13003 919 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.29□□□□□ -0.28
LCA5-202ENST00000392959 CDK20Q8IZL9 346 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 STK40Q8N2I9 435 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 ENKURQ8TC29 256 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 CENPIQ92674 756 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 P2RX7Q99572 595 aaKnown RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 OSGEPL1Q9H4B0 414 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 ARHGAP28Q9P2N2 729 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 UBIAD1Q9Y5Z9 338 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 FGF10O15520 208 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 NFICP08651 508 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 EPHA3P29320 983 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 ITGA1P56199 1179 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 TGM3Q08188 693 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 DDR1Q08345 913 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 INO80DQ53TQ3 878 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 TRMT11Q7Z4G4 463 aaKnown RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 VN1R5Q7Z5H4 357 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 NKAPQ8N5F7 415 aaKnown RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 WDR60Q8WVS4 1066 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 NACC2Q96BF6 587 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 KLQ9UEF7 1012 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 ZNF112Q9UJU3 913 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 CXCL11O14625 94 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 MYL12AP19105 171 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 PAICSP22234 425 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 GABRB2P47870 512 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 TGFB2P61812 414 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 FUT2Q10981 343 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 FKBP1CQ5VVH2 108 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 SYT12Q8IV01 421 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 ZNF483Q8TF39 744 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 KCTD4Q8WVF5 259 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 RCN3Q96D15 328 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 TSEN34Q9BSV6 310 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 POLR1BQ9H9Y6 1135 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 ARL15Q9NXU5 204 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 H0YC42 278 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 FEN1P39748 380 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 IDH2P48735 452 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 PHKG1Q16816 387 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 MFSD5Q6N075 450 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 ALYREFQ86V81 257 aaKnown RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 DNAJB14Q8TBM8 379 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 STARD8Q92502 1023 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 OMDQ99983 421 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 FAM126AQ9BYI3 521 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 ERVK-5Q9HDB9 667 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 ABCC13Q9NSE7 274 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 MORF4L1Q9UBU8 362 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 C3orf18Q9UK00 162 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 SPATA2Q9UM82 520 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 UMODL1Q5DID0 1318 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 MYL12BO14950 172 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 EPN2O95208 641 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 NPR3P17342 541 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 TNK2Q07912 1038 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 KCTD19Q17RG1 926 aaPredicted RBP13.28□□□□□ -0.28
LCA5-202ENST00000392959 HGSNATQ68CP4 663 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 ABRAXAS1Q6UWZ7 409 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 TNS4Q8IZW8 715 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 SERAC1Q96JX3 654 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 OLFM1Q99784 485 aa13.28□□□□□ -0.28
LCA5-202ENST00000392959 SENP6Q9GZR1 1112 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms