RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 BSPRYQ5W0U4 402 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 DHRS4L2Q6PKH6 230 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 KCNT2Q6UVM3 1135 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 NPNTQ6UXI9 565 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 TMEM199Q8N511 208 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 GLIS1Q8NBF1 620 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 SLC7A14Q8TBB6 771 aa19.33■□□□□ 0.68
CCDC50-202ENST00000392456 PRPF18Q99633 342 aaKnown RBP19.33■□□□□ 0.68
CCDC50-202ENST00000392456 GSC2O15499 205 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 CPB1P15086 417 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 ANPEPP15144 967 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 TAC1P20366 129 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 PHBP35232 272 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 CETN2P41208 172 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 WDR45BQ5MNZ6 344 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 ZDHHC24Q6UX98 284 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 METTL25Q8N6Q8 603 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 PIP4K2CQ8TBX8 421 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 PITPNM3Q9BZ71 974 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 DHX35Q9H5Z1 703 aaKnown RBP19.32■□□□□ 0.68
CCDC50-202ENST00000392456 SAR1AQ9NR31 198 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 NUDT5Q9UKK9 219 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 CDY1Q9Y6F8 540 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 MRPL42Q9Y6G3 142 aaKnown RBP19.32■□□□□ 0.68
CCDC50-202ENST00000392456 LTBP2Q14767 1821 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 NOTOA8MTQ0 251 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 RASGRF2O14827 1237 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 LIASO43766 372 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 CREB1P16220 341 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 L1CAMP32004 1257 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 PLTPP55058 493 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 STRADAQ7RTN6 431 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 RFX6Q8HWS3 928 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 MYO1HQ8N1T3 1032 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 ANKRD42Q8N9B4 389 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 FBXO25Q8TCJ0 367 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 STARD13Q9Y3M8 1113 aa19.32■□□□□ 0.68
CCDC50-202ENST00000392456 ARHGAP10A1A4S6 786 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 CNOT3O75175 753 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 FUCA1P04066 466 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 RPL21P46778 160 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 DRG2P55039 364 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 OTUD4Q01804 1114 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 EIF2B5Q13144 721 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 NFE2Q16621 373 aaPredicted RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 ACTL9Q8TC94 416 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 BADQ92934 168 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 BTBD10Q9BSF8 475 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 NMUR1Q9HB89 426 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 CXXC1Q9P0U4 656 aaPredicted RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 PCDHB5Q9Y5E4 795 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 CEP290O15078 2479 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 MTMR11A4FU01 709 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 FAM187AA6NFU0 413 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 TMEM114B3SHH9 223 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 MDM4O15151 490 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 MAP3K6O95382 1288 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 CHN2P52757 468 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 KRT17Q04695 432 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 DUSP4Q13115 394 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 KRT81Q14533 505 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 UBAP2Q5T6F2 1119 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 BBS12Q6ZW61 710 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 SCD5Q86SK9 330 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 PQLC3Q8N755 202 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 PCDH19Q8TAB3 1148 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 LRRN4Q8WUT4 740 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 GIMAP1Q8WWP7 306 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 KCTD15Q96SI1 283 aaPredicted RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
CCDC50-202ENST00000392456 PNPLA8Q9NP80 782 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 OSER1Q9NX31 292 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 AP4E1Q9UPM8 1137 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 NEU2Q9Y3R4 380 aa19.31■□□□□ 0.68
CCDC50-202ENST00000392456 OR6C75A6NL08 312 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 ETS1P14921 441 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 WASHC5Q12768 1159 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 GPR17Q13304 367 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 THOC5Q13769 683 aaKnown RBP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 UGT2A3Q6UWM9 527 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 PDSS2Q86YH6 399 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 GOLM1Q8NBJ4 401 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 EFHD2Q96C19 240 aaPredicted RBP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 EGLN2Q96KS0 407 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 RNF157Q96PX1 679 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 SEMA4AQ9H3S1 761 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 GRHL1Q9NZI5 618 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 TP73O15350 636 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 CCDC22O60826 627 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 ZSCAN5DPP0CG00 497 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 UQCRBP14927 111 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 RPS3AP61247 264 aaKnown RBP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 ASPHQ12797 758 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 ELAVL2Q12926 359 aaKnown RBP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 TAF1BQ53T94 588 aaPredicted RBP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 FYB2Q5VWT5 728 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 FBXO22Q8NEZ5 403 aa19.3■□□□□ 0.68
CCDC50-202ENST00000392456 PTCD2Q8WV60 388 aaKnown RBP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 FUBP3Q96I24 572 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC50-202ENST00000392456 TMEM121Q9BTD3 319 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms