RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ATP13A1Q9HD20 1204 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 SIK3Q9Y2K2 1263 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 FCF1Q9Y324 198 aaKnown RBP16.95■□□□□ 0.3
PTPRK-208ENST00000392449 APC2O95996 2303 aa16.95■□□□□ 0.3
PTPRK-208ENST00000392449 FAM72CH0Y354 149 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 ENC1O14682 589 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 LEFTY1O75610 366 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 LDOC1O95751 146 aaPredicted RBP16.94■□□□□ 0.3
PTPRK-208ENST00000392449 ACVRL1P37023 503 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 SYCP1Q15431 976 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 SLC45A4Q5BKX6 768 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 CT47A1Q5JQC4 288 aaPredicted RBP16.94■□□□□ 0.3
PTPRK-208ENST00000392449 FAM72AQ5TYM5 149 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 SEL1L3Q68CR1 1132 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 FAM72DQ6L9T8 149 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 C19orf48Q6RUI8 117 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 LEKR1Q6ZMV7 388 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 CLEC17AQ6ZS10 378 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 KANSL1Q7Z3B3 1105 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 FAM72BQ86X60 149 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 PREBQ9HCU5 417 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 WASF2Q9Y6W5 498 aa16.94■□□□□ 0.3
PTPRK-208ENST00000392449 ARID1BQ8NFD5 2236 aaPredicted RBP16.94■□□□□ 0.3
PTPRK-208ENST00000392449 ILVBLA1L0T0 632 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 HOXB3P14651 431 aaPredicted RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ARRB1P49407 418 aaPredicted RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 SERPINH1P50454 418 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 DNA2P51530 1060 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 GNA12Q03113 381 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 PTP4A2Q12974 167 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CAMK2BQ13554 666 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 STAT4Q14765 748 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 SMAD1Q15797 465 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ZNF284Q2VY69 593 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 SETMARQ53H47 684 aaPredicted RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 RBM43Q6ZSC3 357 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ZNF677Q86XU0 584 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CCDC185Q8N715 623 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 TMIEQ8NEW7 156 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 OR6K2Q8NGY2 324 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 OR12D3Q9UGF7 316 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 IL36AQ9UHA7 158 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ZFR2Q9UPR6 939 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 NEU3Q9UQ49 428 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 DMTF1Q9Y222 760 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 RAXQ9Y2V3 346 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 FARP1Q9Y4F1 1045 aaPredicted RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 TDRD6O60522 2096 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 LOC400499M0QZD8 3231 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CHD5Q8TDI0 1954 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 TRABD2BA6NFA1 517 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 C2CD4BA6NLJ0 364 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 PRAMEF26H0Y7S4 382 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CD160O95971 181 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 SDC4P31431 198 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 GKP32189 559 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ADRA1BP35368 520 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CLCN6P51797 869 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CLDN2P57739 230 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CYP4F3Q08477 520 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 FKBP15Q5T1M5 1219 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 MANEALQ5VSG8 457 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 SFMBT2Q5VUG0 894 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 RWDD4Q6NW29 188 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ERN2Q76MJ5 926 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ARCQ7LC44 396 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 TMEM145Q8NBT3 493 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 CCDC114Q96M63 670 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 PCMTD1Q96MG8 357 aaPredicted RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 TM6SF2Q9BZW4 377 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ERVMER34-1Q9H9K5 563 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 DYRK4Q9NR20 520 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 DNAI1Q9UI46 699 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
PTPRK-208ENST00000392449 LHX6Q9UPM6 363 aa16.93■□□□□ 0.3
PTPRK-208ENST00000392449 ACACAQ13085 2346 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 ADAMTS20P59510 1910 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 PCDH8O95206 1070 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 PRNPP04156 253 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 UNGP13051 313 aaPredicted RBP16.92■□□□□ 0.3
PTPRK-208ENST00000392449 RECQLP46063 649 aaPredicted RBP16.92■□□□□ 0.3
PTPRK-208ENST00000392449 RXRGP48443 463 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 ACADVLP49748 655 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 HDAC4P56524 1084 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 HORMAD1Q86X24 394 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 GALNT15Q8N3T1 639 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 NETO2Q8NC67 525 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 FAM172AQ8WUF8 416 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 PPARGC1AQ9UBK2 798 aaKnown RBP16.92■□□□□ 0.3
PTPRK-208ENST00000392449 GPSM3Q9Y4H4 160 aa16.92■□□□□ 0.3
PTPRK-208ENST00000392449 TRPM6Q9BX84 2022 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 YKT6O15498 198 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 LRIG2O94898 1065 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 THEGLP0DJG4 465 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 RFC1P35251 1148 aaPredicted RBP16.91■□□□□ 0.3
PTPRK-208ENST00000392449 ANP32AP39687 249 aaKnown RBP16.91■□□□□ 0.3
PTPRK-208ENST00000392449 STAT1P42224 750 aa16.91■□□□□ 0.3
PTPRK-208ENST00000392449 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms