RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CBWD6Q4V339 395 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 CBWD3Q5JTY5 395 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 CBWD5Q5RIA9 395 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF549Q6P9A3 640 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 SPATA6LQ8N4H0 392 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 RNASE11Q8TAA1 199 aaKnown RBP16.35■□□□□ 0.21
SHANK1-204ENST00000391814 AP3S1Q92572 193 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 CIB1Q99828 191 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-204ENST00000391814 PTPN5P54829 565 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 FITM2Q8N6M3 262 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 DENND2DQ9H6A0 471 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-204ENST00000391814 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 USP12O75317 370 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 CYP7B1O75881 506 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ARP10275 920 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 YWHAQP27348 245 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 PPP2R1BP30154 601 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 OLFML2AQ68BL7 652 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ARMC6Q6NXE6 501 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 WDR49Q8IV35 697 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 ZBTB8BQ8NAP8 495 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-204ENST00000391814 PSMD13Q9UNM6 376 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 PEX11AO75192 247 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 MARCKSL1P49006 195 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 CARNMT1Q8N4J0 409 aa16.35■□□□□ 0.21
SHANK1-204ENST00000391814 SPPL2CQ8IUH8 684 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 EGFL6Q8IUX8 553 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 OMDQ99983 421 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 GSDMCQ9BYG8 508 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ABCB9Q9NP78 766 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PRMT7Q9NVM4 692 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PRKAG3Q9UGI9 489 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ERGIC3Q9Y282 383 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 WDR37Q9Y2I8 494 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 SH3BP1Q9Y3L3 701 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 F5H5T6 163 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 BIRC5O15392 142 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 HPCAL1P37235 193 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 NR2C2P49116 596 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PEX6Q13608 980 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PFKFB4Q16877 469 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF772Q68DY9 489 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ZCCHC8Q6NZY4 707 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PRR23CQ6ZRP0 262 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ARCQ7LC44 396 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ADCY4Q8NFM4 1077 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 BCAT1P54687 386 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 NTRK3Q16288 839 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 SYT12Q8IV01 421 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ADGRF2Q8IZF7 708 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PDPRQ8NCN5 879 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 RBM15BQ8NDT2 890 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 SERAC1Q96JX3 654 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 KCNS3Q9BQ31 491 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 SENP6Q9GZR1 1112 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 STN1Q9H668 368 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 SLC38A7Q9NVC3 462 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PHF11Q9UIL8 331 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 RECQL5O94762 991 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ASS1P00966 412 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PEX2P28328 305 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PCSK1P29120 753 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 TPTEP56180 551 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 TNS4Q8IZW8 715 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 LRRN4Q8WUT4 740 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 MOV10Q9HCE1 1003 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 PTTG2Q9NZH5 202 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 TNS3Q68CZ2 1445 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 NOTOA8MTQ0 251 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 LINC00032P0C843 101 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 TCF7P36402 384 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 SPIBQ01892 262 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 KHDC1Q4VXA5 237 aaKnown RBP16.34■□□□□ 0.21
SHANK1-204ENST00000391814 RUNDC3AQ59EK9 446 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF544Q6NX49 715 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 MOSPD2Q8NHP6 518 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ELMO1Q92556 727 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 ASB2Q96Q27 587 aa16.34■□□□□ 0.21
SHANK1-204ENST00000391814 H7C0S8 307 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 CYP1A2P05177 515 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 GABRB2P47870 512 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 OXCT1P55809 520 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 TUBA4AP68366 448 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 STARD3Q14849 445 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 FAM187BQ17R55 369 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 TDRD10Q5VZ19 366 aaKnown RBP16.33■□□□□ 0.21
SHANK1-204ENST00000391814 ANKS6Q68DC2 871 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 LPCAT1Q8NF37 534 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 ATXN3LQ9H3M9 355 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 MARCH7Q9H992 704 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 C12orf4Q9NQ89 552 aa16.33■□□□□ 0.21
SHANK1-204ENST00000391814 CNTNAP2Q9UHC6 1331 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms