RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 CABS1Q96KC9 395 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 TIGD1Q96MW7 591 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 SRSF8Q9BRL6 282 aaKnown RBP2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 PACSIN1Q9BY11 444 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 TPSD1Q9BZJ3 242 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 EDEM3Q9BZQ6 932 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 KLHL4Q9C0H6 718 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 STN1Q9H668 368 aaKnown RBP2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 ERVK-5Q9HDB9 667 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 NRIP3Q9NQ35 241 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 CNNM1Q9NRU3 951 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 RXFP3Q9NSD7 469 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 PDRG1Q9NUG6 133 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 HDAC6Q9UBN7 1215 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLCO3A1Q9UIG8 710 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 GTF3C4Q9UKN8 822 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 PADI1Q9ULC6 663 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 MAFFQ9ULX9 164 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 HPSEQ9Y251 543 aa2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 MRPS17Q9Y2R5 130 aaKnown RBP2.31□□□□□ -2.04
SNORA40.19-201ENST00000390846 LOC102723971A0A1B0GUV8 181 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 A4D1N5 150 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 AGAP5A6NIR3 686 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 LIPT2A6NK58 231 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF785A8K8V0 405 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 C17orf100A8MU93 164 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 M0QYG6 137 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 PEX12O00623 359 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ADAMDEC1O15204 470 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 KINO60870 393 aaKnown RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SOCS5O75159 536 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 VPS4BO75351 444 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 TFRCP02786 760 aaKnown RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RPLP2P05387 115 aaKnown RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 CSF1RP07333 972 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 QDPRP09417 244 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 PIM1P11309 404 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ATP5F1P24539 256 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 TBXAS1P24557 533 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 HOXD9P28356 352 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSMC2P35998 433 aaKnown RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ATP6V1E1P36543 226 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 THPOP40225 353 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 GCLCP48506 637 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF131P52739 623 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF135P52742 658 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 POLE2P56282 527 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 KRT17Q04695 432 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 PIGFQ07326 219 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SRSF1Q07955 248 aaKnown RBP eCLIP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ACTN3Q08043 901 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 TFCP2Q12800 502 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SF3A3Q12874 501 aaKnown RBP eCLIP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 TMEM115Q12893 351 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 EPS8Q12929 822 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 MTAPQ13126 283 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLC14A1Q13336 389 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 LAMB3Q13751 1172 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 TNFAIP1Q13829 316 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SEMA3AQ14563 771 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLMAPQ14BN4 828 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RABEP1Q15276 862 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF628Q5EBL2 1059 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RNASE12Q5GAN4 147 aaKnown RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RAB41Q5JT25 222 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 CBWD5Q5RIA9 395 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ARMC4Q5T2S8 1044 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ERMARDQ5T6L9 678 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ATPAF1Q5TC12 328 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLC9A4Q6AI14 798 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SUMO4Q6EEV6 95 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RAB12Q6IQ22 244 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 MRNIPQ6NTE8 343 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 PIK3AP1Q6ZUJ8 805 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 LRRC8DQ7L1W4 858 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RAB11FIP2Q7L804 512 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 GALNT7Q86SF2 657 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 GAS2L3Q86XJ1 694 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 YAF2Q8IY57 180 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SFRP1Q8N474 314 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 METTL25Q8N6Q8 603 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 FRMD1Q8N878 549 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 IL17RCQ8NAC3 791 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 IPMKQ8NFU5 416 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 NFKBIDQ8NI38 313 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 CLEC4CQ8WTT0 213 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZDHHC12Q96GR4 267 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 FEM1CQ96JP0 617 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 LINC00615Q96LM1 132 aaPredicted RBP2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 FAM227BQ96M60 508 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 FER1L6-AS2Q96M78 137 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 C5orf34Q96MH7 638 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 GCNAQ96QF7 691 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 WDR24Q96S15 920 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 PIGSQ96S52 555 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 SMOQ99835 787 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 HTATIP2Q9BUP3 242 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 HEMGNQ9BXL5 484 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 TAOK3Q9H2K8 898 aa2.3□□□□□ -2.04
SNORA40.19-201ENST00000390846 RANBP17Q9H2T7 1088 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms