RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 MTA1Q13330 715 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 ACVR2BQ13705 512 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 GALNT3Q14435 633 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 TAF11Q15544 211 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 HIST2H2ACQ16777 129 aaPredicted RBP3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 DPCR1Q3MIW9 517 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 EARS2Q5JPH6 523 aaKnown RBP3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 PLEKHS1Q5SXH7 462 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 FAM171A1Q5VUB5 890 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 ISM2Q6H9L7 571 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 ZNF280DQ6N043 979 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 TMEM154Q6P9G4 183 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 NCEH1Q6PIU2 408 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 CYB5R4Q7L1T6 521 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 GALNT5Q7Z7M9 940 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 TMC8Q8IU68 726 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 TTC39CQ8N584 583 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 AMER2Q8N7J2 671 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 KCNG4Q8TDN1 519 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 FAR1Q8WVX9 515 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 LARP4BQ92615 738 aaKnown RBP3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 SGCDQ92629 289 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 SARAFQ96BY9 339 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 KLHL15Q96M94 604 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 FCRL5Q96RD9 977 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 SERINC2Q96SA4 455 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 ITPAQ9BY32 194 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 PCDHB16Q9NRJ7 776 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 ZDHHC7Q9NXF8 308 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 NCKIPSDQ9NZQ3 722 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 KIAA1456Q9P272 454 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 UPB1Q9UBR1 384 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 SLCO3A1Q9UIG8 710 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 HAO1Q9UJM8 370 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 A4GNTQ9UNA3 340 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 ICKQ9UPZ9 632 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 INSL6Q9Y581 213 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 RPS6KL1Q9Y6S9 549 aa3.14□□□□□ -1.91
TRAJ40-201ENST00000390497 A0A087X1B8 175 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 TCRBV7S3A2A0A539 114 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 C17orf102A2RUQ5 167 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 B4DLN1 442 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 USP17L23D6RBM5 183 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 RRHO14718 337 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SCAMP1O15126 338 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 VILLO15195 856 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 BCAT2O15382 392 aaPredicted RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 TGFB1I1O43294 461 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 HNRNPCL1O60812 293 aaKnown RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 RAMP2O60895 175 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 FZD7O75084 574 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 PLAUP00749 431 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 ADAP00813 363 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 HOXB5P09067 269 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 PCNAP12004 261 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC2A4P14672 509 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 YWHAQP27348 245 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 PTGER1P34995 402 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC16A2P36021 539 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 GNAQP50148 359 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 CREB5Q02930 508 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 CALD1Q05682 793 aaKnown RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 NIPAL4Q0D2K0 466 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 TMEM115Q12893 351 aaPredicted RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 OLIG2Q13516 323 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 STIM1Q13586 685 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 VEPH1Q14D04 833 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 RPE65Q16518 533 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 FAM133BQ5BKY9 247 aaKnown RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SERTAD4-AS1Q5TG53 156 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 AAGABQ6PD74 315 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 LRIG3Q6UXM1 1119 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC46A3Q7Z3Q1 461 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 RNF144BQ7Z419 303 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 FAM160B2Q86V87 743 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 CHSY1Q86X52 802 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 TICAM1Q8IUC6 712 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 ZDHHC23Q8IYP9 409 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 FAM185AQ8N0U4 392 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 TAGAPQ8N103 731 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 PLD5Q8N7P1 536 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 FRMD1Q8N878 549 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 ARL14EPQ8N8R7 260 aaPredicted RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 PNLDC1Q8NA58 520 aaKnown RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 NEU4Q8WWR8 484 aaPredicted RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 INTS12Q96CB8 462 aaKnown RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 RITA1Q96K30 269 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 STRA6Q9BX79 667 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 HIPK3Q9H422 1215 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SLC32A1Q9H598 525 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 KAT14Q9H8E8 782 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 ASAH2Q9NR71 780 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 SEMA4GQ9NTN9 838 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 ANKEF1Q9NU02 776 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 HDAC6Q9UBN7 1215 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 ZNF215Q9UL58 517 aaPredicted RBP3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 MTMR6Q9Y217 621 aa3.13□□□□□ -1.91
TRAJ40-201ENST00000390497 FAM237BA0A1B0GVD1 139 aa3.12□□□□□ -1.91
TRAJ40-201ENST00000390497 PABPN1LA6NDY0 278 aaKnown RBP3.12□□□□□ -1.91
TRAJ40-201ENST00000390497 C17orf100A8MU93 164 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms