RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 MAGED4Q96JG8 741 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 NTPCRQ9BSD7 190 aaKnown RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 B3GNT5Q9BYG0 378 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 PCDHAC1Q9H158 963 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 RERGLQ9H628 205 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 CD274Q9NZQ7 290 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 AFF4Q9UHB7 1163 aaKnown RBP14.46□□□□□ -0.1
RTF1-201ENST00000389629 ADAMTS6Q9UKP5 1117 aa14.46□□□□□ -0.1
RTF1-201ENST00000389629 TJP1Q07157 1748 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 DHRS12A0PJE2 317 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 PABPC4LP0CB38 370 aaKnown RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 FRG1Q14331 258 aaKnown RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 C11orf91Q3C1V1 193 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 SIX5Q8N196 739 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 OR7A2PQ8NGA2 310 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 ACTRT2Q8TDY3 377 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 CLEC4DQ8WXI8 215 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 FBXL18Q96ME1 805 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 DHX33Q9H6R0 707 aaKnown RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 XPR1Q9UBH6 696 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 J3QRK9 145 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 CNOT3O75175 753 aaKnown RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 H6PDO95479 791 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 C2P06681 752 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 ENTPD1P49961 510 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 TMEM198Q66K66 360 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 ZBTB8BQ8NAP8 495 aaPredicted RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 FBXL8Q96CD0 374 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 SPON2Q9BUD6 331 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 CDT1Q9H211 546 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 NR2E3Q9Y5X4 410 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 HACD1B0YJ81 288 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 ITGA7Q13683 1181 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 DNAJC14Q6Y2X3 702 aaPredicted RBP14.45□□□□□ -0.1
RTF1-201ENST00000389629 MID1IP1Q9NPA3 183 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 MYH11P35749 1972 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 NUP98P52948 1817 aa14.45□□□□□ -0.1
RTF1-201ENST00000389629 ANXA9O76027 345 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 CD4P01730 458 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 CDH17Q12864 832 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 BROXQ5VW32 411 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ABHD15Q6UXT9 468 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 UNC5BQ8IZJ1 945 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 UBR7Q8N806 425 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.44□□□□□ -0.12e-7■■■■■ 62.8
RTF1-201ENST00000389629 COQ7Q99807 217 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 CEP44Q9C0F1 390 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ASB7Q9H672 318 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 FOXD2O60548 495 aaPredicted RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 DGUOKQ16854 277 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 LSM12Q3MHD2 195 aaKnown RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 ARL13AQ5H913 290 aaPredicted RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 PITRM1Q5JRX3 1037 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 XKR5Q6UX68 686 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SPATA17Q96L03 361 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 DNAJC28Q9NX36 388 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ANAPC2Q9UJX6 822 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 PCDHGC3Q9UN70 934 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 H3BNX3 289 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 CD151P48509 253 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 NOVP48745 357 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 TAF6P49848 677 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SLC9A4Q6AI14 798 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ZDHHC13Q8IUH4 622 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 MPP5Q8N3R9 675 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 POC5Q8NA72 575 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SLC2A14Q8TDB8 520 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 GATA6Q92908 595 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 CDHR5Q9HBB8 845 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 NDFIP2Q9NV92 336 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 MORF4L1Q9UBU8 362 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 SQORQ9Y6N5 450 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ZNF541Q9H0D2 1346 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 MAGEB16A2A368 324 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 TOMM70O94826 608 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 F7P08709 466 aaPredicted RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 RBP1P09455 135 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 TFEBP19484 476 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 IREB2P48200 963 aaKnown RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 SLC18A2Q05940 514 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 VAC14Q08AM6 782 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 MYBPC3Q14896 1274 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SLC9B1Q4ZJI4 515 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ATG14Q6ZNE5 492 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 HORMAD1Q86X24 394 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 APOBEC3FQ8IUX4 373 aaKnown RBP14.44□□□□□ -0.1
RTF1-201ENST00000389629 AHI1Q8N157 1196 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ELOVL4Q9GZR5 314 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 ARMC7Q9H6L4 198 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SNTG2Q9NY99 539 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SH3BP1Q9Y3L3 701 aa14.44□□□□□ -0.1
RTF1-201ENST00000389629 SLC15A5A6NIM6 579 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 GRIA1P42261 906 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 MAP3K7CLP57077 242 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 BNIP3Q12983 259 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 SPPL2CQ8IUH8 684 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 ERI1Q8IV48 349 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms