RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CAPN9O14815 690 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 INPPL1O15357 1258 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DAPK3O43293 454 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TSPAN3O60637 253 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CLEC3AO75596 197 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KRT37O76014 449 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HPRP00739 348 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGLV1-47P01700 117 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SBK3P0C264 359 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 USP17L7P0C7H9 530 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 XRCC5P13010 732 aaKnown RBP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC5A1P13866 664 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PCSK2P16519 638 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KCNA6P17658 529 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 EGR1P18146 543 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NPR2P20594 1047 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MCM3P25205 808 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MAP2K2P36507 400 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MAPK9P45984 424 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CTXN1P60606 82 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CACNG7P62955 275 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 APBA1Q02410 837 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PAX5Q02548 391 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC20A2Q08357 652 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NSUN2Q08J23 767 aaKnown RBP eCLIP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RUNX3Q13761 415 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF674Q2M3X9 581 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 C4orf46Q504U0 113 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ANKRD39Q53RE8 183 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KLF17Q5JT82 389 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DNLZQ5SXM8 178 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ATF7IPQ6VMQ6 1270 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RANBP10Q6VN20 620 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CCDC84Q86UT8 332 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC25A42Q86VD7 318 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGFN1Q86VF2 1251 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CARM1Q86X55 608 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ADGRG5Q8IZF4 528 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF664Q8N3J9 261 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ARHGEF39Q8N4T4 335 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ESX1Q8N693 406 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 METTL27Q8N6F8 245 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KDM1BQ8NB78 822 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 WDR48Q8TAF3 677 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC35B2Q8TB61 432 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ATRIPQ8WXE1 791 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 COPS5Q92905 334 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CCDC17Q96LX7 622 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SMC6Q96SB8 1091 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KRT12Q99456 494 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PRRT1Q99946 306 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MAK16Q9BXY0 300 aaKnown RBP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TASP1Q9H6P5 420 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MAP6D1Q9H9H5 199 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LRRC4Q9HBW1 653 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DDX4Q9NQI0 724 aaKnown RBP-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NIT2Q9NQR4 276 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NUDT4Q9NZJ9 180 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OPN4Q9UHM6 478 aa-2.12□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CGNL1Q0VF96 1302 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 A0A087WZG4 1122 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KLF18A0A0U1RQI7 1052 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GAGE12JA6NER3 117 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FAM90A27PA6NNH2 459 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PJA2O43164 708 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MARCH6O60337 910 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MAGEC1O60732 1142 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GALR3O60755 368 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SOX30O94993 753 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PMS2P2O95744 297 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGLV2-8P01709 118 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZSCAN5DPP0CG00 497 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 EEF2P13639 858 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ATF7P17544 494 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 APEX1P27695 318 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TYK2P29597 1187 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HTR1FP30939 366 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LIPAP38571 399 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CCR5P51681 352 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SEC13P55735 322 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CLRN1P58418 232 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RPP30P78346 268 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MYO1EQ12965 1108 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GPR18Q14330 331 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HLXQ14774 488 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 EFNB3Q15768 340 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF630Q2M218 657 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FNDC3BQ53EP0 1204 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FSCBQ5H9T9 825 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PCNX4Q63HM2 1172 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TXNRD3NBQ6F5E7 133 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF600Q6ZNG1 722 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ESPNLQ6ZVH7 1005 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KCTD1Q719H9 257 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PARS2Q7L3T8 475 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MDGA2Q7Z553 956 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RAVER1Q8IY67 606 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF683Q8IZ20 524 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC25A45Q8N413 288 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OGFOD1Q8N543 542 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms